What's new ?

Jalview Version 2.07

Sequence Fetcher has been added to quickly retrieve sequences with known ids from several databases.

Sequence Features enhanced to allow the user to display all features of a Uniprot file on the alignment and subsequently colour, hide or show overlapping features.

Choose to omit /start-end from sequences when saving files. This is important for saving files to be used by some programs which cannot read the original Jalview sequence output with the appended /start-end.

PDB structure viewer enhanced. Mapping between sequence and structure has been enhanced, colours on the alignment are reflected in the structure viewer.

Jalview Applet can read in feature files, PDB files be used as input to HTML form See the website to find out the new parameters available for the Applet Version of Jalview.

Issues Resolved

Group Editing is possible with Control and mouse click. Alt key and mouse press does not work as this translates as the middle mouse button, which since 2.04 is now used to scroll the alignment and change the font size.

HTML export now writes groups and features which were previously missing.

See the Release History page for details of all new features and resolved issues.