developed after mapRangeType from http://www.vamsas.ac.uk/schemas/1.0/vamsasTypes This effectively represents a java.util.MapList object a region from start to end inclusive a region from start to end inclusive number of dictionary symbol widths involved in each mapped position on this sequence (for example, 3 for a dna sequence exon region that is being mapped to a protein sequence). This is optional, since the unit can be usually be inferred from the dictionary type of each sequence involved in the mapping. number of dictionary symbol widths involved in each mapped position on this sequence (for example, 3 for a dna sequence exon region that is being mapped to a protein sequence). This is optional, since the unit can be usually be inferred from the dictionary type of each sequence involved in the mapping. Represent the jalview.datamodel.Mapping object - it also provides a way of storing sequences that are mapped 'to' without adding them to the sequence set (which will mean they are then added to the alignment too). The sequence whose dataset sequence is to be referenced here specifies a series of aligned codons from an associated DNA sequence alignment that when translated correspond to columns of a peptide alignment. Element may have either all pos1,2,3 attributes specified, or none at all (indicating a gapped column with no translated peptide). a Mapping entry and an associated protein sequence internal jalview id for the dnasq for this mapping. dataset sequence id for this sequence. Will be created as union of sequences. height in pixels for the graph if this is a graph-type annotation. is an autocalculated annotation row is to be shown below the alignment - introduced in Jalview 2.8 for visualizing T-COFFEE alignment scores Optional string identifier used to group sets of annotation produced by a particular calculation. Values are opaque strings but have semantic meaning to Jalview's renderer, data importer and calculation system. reference to set where jalview will gather the dataset sequences for all sequences in the set.