/*
* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
* Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
* Jalview is free software: you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation, either version 3
* of the License, or (at your option) any later version.
*
* Jalview is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty
* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
* PURPOSE. See the GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with Jalview. If not, see .
* The Jalview Authors are detailed in the 'AUTHORS' file.
*/
package jalview.api;
import jalview.datamodel.SequenceFeature;
import jalview.datamodel.SequenceI;
import java.awt.Color;
import java.util.Hashtable;
import java.util.List;
import java.util.Map;
/**
* Abstract feature renderer interface
*
* @author JimP
*
*/
public interface FeatureRenderer
{
Color findFeatureColour(Color col, SequenceI sequenceI, int r);
void featuresAdded();
Object getFeatureStyle(String ft);
void setColour(String ft, Object ggc);
AlignViewportI getViewport();
FeaturesDisplayedI getFeaturesDisplayed();
Map getFeatureColours();
void findAllFeatures(boolean newMadeVisible);
Map getDisplayedFeatureCols();
List getFeatureGroups();
List getGroups(boolean visible);
void setGroupVisibility(List toset, boolean visible);
void setGroupVisibility(String group, boolean visible);
List findFeaturesAtRes(SequenceI sequence, int res);
boolean isTransparencyAvailable();
String[] getDisplayedFeatureTypes();
String[] getDisplayedFeatureGroups();
void setAllVisible(List featureTypes);
void setVisible(String featureType);
}