/* * Jalview - A Sequence Alignment Editor and Viewer * Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle * * This program is free software; you can redistribute it and/or * modify it under the terms of the GNU General Public License * as published by the Free Software Foundation; either version 2 * of the License, or (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program; if not, write to the Free Software * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA */ package jalview.appletgui; import java.awt.*; import java.awt.event.*; import jalview.datamodel.*; import jalview.io.*; public class CutAndPasteTransfer extends Panel implements ActionListener, MouseListener { jalview.bin.JalviewLite applet; boolean pdbImport = false; Sequence seq; SeqCanvas seqcanvas; public CutAndPasteTransfer(boolean forImport, jalview.bin.JalviewLite mainApplet) { try { jbInit(); } catch (Exception e) { e.printStackTrace(); } applet = mainApplet; if (!forImport) { buttonPanel.setVisible(false); } } public void setPDBImport(Sequence seq, SeqCanvas seqcanvas) { this.seq = seq; this.seqcanvas = seqcanvas; pdbImport = true; } public String getText() { return textarea.getText(); } public void setText(String text) { textarea.setText(text); } public void actionPerformed(ActionEvent evt) { if(evt.getSource()==ok) ok_actionPerformed(); else if(evt.getSource()==cancel) cancel_actionPerformed(); } protected void ok_actionPerformed() { String text = getText(); int length = text.length(); textarea.append("\n"); if(textarea.getText().length()==length) { String warning = "\n\n#################################################\n" +"WARNING!! THIS IS THE MAXIMUM SIZE OF TEXTAREA!!\n" +"\nCAN'T INPUT FULL ALIGNMENT" +"\n\nYOU MUST DELETE THIS WARNING TO CONTINUE" +"\n\nMAKE SURE LAST SEQUENCE PASTED IS COMPLETE" +"\n#################################################\n"; textarea.setText(text.substring(0, text.length()-warning.length()) +warning); textarea.setCaretPosition(text.length()); } if(pdbImport) { new MCview.AppletPDBViewer(text, AppletFormatAdapter.PASTE, seq, seqcanvas); } else { SequenceI[] sequences = null; String format = new IdentifyFile().Identify(text, AppletFormatAdapter.PASTE); try{ sequences = new AppletFormatAdapter().readFile(text, AppletFormatAdapter.PASTE, format); }catch(java.io.IOException ex) { ex.printStackTrace(); } if (sequences != null) { AlignFrame af = new AlignFrame(new Alignment(sequences), applet, "Cut & Paste input - " + format); af.statusBar.setText("Successfully pasted alignment file"); } } ((Frame)this.getParent()).setVisible(false); } protected void cancel_actionPerformed() { ((Frame)this.getParent()).setVisible(false); } protected TextArea textarea = new TextArea(); Button ok = new Button(); Button cancel = new Button(); protected Panel buttonPanel = new Panel(); BorderLayout borderLayout1 = new BorderLayout(); private void jbInit() throws Exception { textarea.setFont(new java.awt.Font("Monospaced", Font.PLAIN, 10)); textarea.setText("Paste your alignment file here"); textarea.addMouseListener(this); this.setLayout(borderLayout1); ok.setLabel("OK"); ok.addActionListener(this); cancel.setLabel("Cancel"); cancel.addActionListener(this); this.add(buttonPanel, BorderLayout.SOUTH); buttonPanel.add(ok, null); buttonPanel.add(cancel, null); this.add(textarea, java.awt.BorderLayout.CENTER); } public void mousePressed(MouseEvent evt) { if (textarea.getText().startsWith("Paste your")) { textarea.setText(""); } } public void mouseReleased(MouseEvent evt){} public void mouseClicked(MouseEvent evt){} public void mouseEntered(MouseEvent evt){} public void mouseExited(MouseEvent evt){} }