/******************************************************************************* * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7) * Copyright (C) 2011 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle * * This file is part of Jalview. * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR * PURPOSE. See the GNU General Public License for more details. * * You should have received a copy of the GNU General Public License along with Jalview. If not, see . *******************************************************************************/ /* * This class was automatically generated with * Castor 1.1, using an XML * Schema. * $Id$ */ package jalview.binding; //---------------------------------/ //- Imported classes and packages -/ //---------------------------------/ import org.exolab.castor.xml.Marshaller; import org.exolab.castor.xml.Unmarshaller; /** * Class FeatureSettings. * * @version $Revision$ $Date$ */ public class FeatureSettings implements java.io.Serializable { //--------------------------/ //- Class/Member Variables -/ //--------------------------/ /** * Field _settingList. */ private java.util.Vector _settingList; //----------------/ //- Constructors -/ //----------------/ public FeatureSettings() { super(); this._settingList = new java.util.Vector(); } //-----------/ //- Methods -/ //-----------/ /** * * * @param vSetting * @throws java.lang.IndexOutOfBoundsException if the index * given is outside the bounds of the collection */ public void addSetting( final jalview.binding.Setting vSetting) throws java.lang.IndexOutOfBoundsException { this._settingList.addElement(vSetting); } /** * * * @param index * @param vSetting * @throws java.lang.IndexOutOfBoundsException if the index * given is outside the bounds of the collection */ public void addSetting( final int index, final jalview.binding.Setting vSetting) throws java.lang.IndexOutOfBoundsException { this._settingList.add(index, vSetting); } /** * Method enumerateSetting. * * @return an Enumeration over all jalview.binding.Setting * elements */ public java.util.Enumeration enumerateSetting( ) { return this._settingList.elements(); } /** * Method getSetting. * * @param index * @throws java.lang.IndexOutOfBoundsException if the index * given is outside the bounds of the collection * @return the value of the jalview.binding.Setting at the * given index */ public jalview.binding.Setting getSetting( final int index) throws java.lang.IndexOutOfBoundsException { // check bounds for index if (index < 0 || index >= this._settingList.size()) { throw new IndexOutOfBoundsException("getSetting: Index value '" + index + "' not in range [0.." + (this._settingList.size() - 1) + "]"); } return (jalview.binding.Setting) _settingList.get(index); } /** * Method getSetting.Returns the contents of the collection in * an Array.

Note: Just in case the collection contents * are changing in another thread, we pass a 0-length Array of * the correct type into the API call. This way we know * that the Array returned is of exactly the correct length. * * @return this collection as an Array */ public jalview.binding.Setting[] getSetting( ) { jalview.binding.Setting[] array = new jalview.binding.Setting[0]; return (jalview.binding.Setting[]) this._settingList.toArray(array); } /** * Method getSettingCount. * * @return the size of this collection */ public int getSettingCount( ) { return this._settingList.size(); } /** * Method isValid. * * @return true if this object is valid according to the schema */ public boolean isValid( ) { try { validate(); } catch (org.exolab.castor.xml.ValidationException vex) { return false; } return true; } /** * * * @param out * @throws org.exolab.castor.xml.MarshalException if object is * null or if any SAXException is thrown during marshaling * @throws org.exolab.castor.xml.ValidationException if this * object is an invalid instance according to the schema */ public void marshal( final java.io.Writer out) throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { Marshaller.marshal(this, out); } /** * * * @param handler * @throws java.io.IOException if an IOException occurs during * marshaling * @throws org.exolab.castor.xml.ValidationException if this * object is an invalid instance according to the schema * @throws org.exolab.castor.xml.MarshalException if object is * null or if any SAXException is thrown during marshaling */ public void marshal( final org.xml.sax.ContentHandler handler) throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { Marshaller.marshal(this, handler); } /** */ public void removeAllSetting( ) { this._settingList.clear(); } /** * Method removeSetting. * * @param vSetting * @return true if the object was removed from the collection. */ public boolean removeSetting( final jalview.binding.Setting vSetting) { boolean removed = _settingList.remove(vSetting); return removed; } /** * Method removeSettingAt. * * @param index * @return the element removed from the collection */ public jalview.binding.Setting removeSettingAt( final int index) { java.lang.Object obj = this._settingList.remove(index); return (jalview.binding.Setting) obj; } /** * * * @param index * @param vSetting * @throws java.lang.IndexOutOfBoundsException if the index * given is outside the bounds of the collection */ public void setSetting( final int index, final jalview.binding.Setting vSetting) throws java.lang.IndexOutOfBoundsException { // check bounds for index if (index < 0 || index >= this._settingList.size()) { throw new IndexOutOfBoundsException("setSetting: Index value '" + index + "' not in range [0.." + (this._settingList.size() - 1) + "]"); } this._settingList.set(index, vSetting); } /** * * * @param vSettingArray */ public void setSetting( final jalview.binding.Setting[] vSettingArray) { //-- copy array _settingList.clear(); for (int i = 0; i < vSettingArray.length; i++) { this._settingList.add(vSettingArray[i]); } } /** * Method unmarshal. * * @param reader * @throws org.exolab.castor.xml.MarshalException if object is * null or if any SAXException is thrown during marshaling * @throws org.exolab.castor.xml.ValidationException if this * object is an invalid instance according to the schema * @return the unmarshaled jalview.binding.FeatureSettings */ public static jalview.binding.FeatureSettings unmarshal( final java.io.Reader reader) throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { return (jalview.binding.FeatureSettings) Unmarshaller.unmarshal(jalview.binding.FeatureSettings.class, reader); } /** * * * @throws org.exolab.castor.xml.ValidationException if this * object is an invalid instance according to the schema */ public void validate( ) throws org.exolab.castor.xml.ValidationException { org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator(); validator.validate(this); } }