/* * This class was automatically generated with * Castor 0.9.6, using an XML * Schema. * $Id$ */ /* * Jalview - A Sequence Alignment Editor and Viewer * Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle * * This program is free software; you can redistribute it and/or * modify it under the terms of the GNU General Public License * as published by the Free Software Foundation; either version 2 * of the License, or (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program; if not, write to the Free Software * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA */ package jalview.binding; import org.exolab.castor.xml.MarshalException; import org.exolab.castor.xml.Marshaller; import org.exolab.castor.xml.Unmarshaller; import org.exolab.castor.xml.ValidationException; import org.xml.sax.ContentHandler; //---------------------------------/ //- Imported classes and packages -/ //---------------------------------/ import java.io.IOException; import java.io.Reader; import java.io.Serializable; import java.io.Writer; /** * Class Sequence. * * @version $Revision$ $Date$ */ public class Sequence extends SequenceType implements java.io.Serializable { //----------------/ //- Constructors -/ //----------------/ public Sequence() { super(); } //-- jalview.binding.Sequence() //-----------/ public boolean isValid() { try { validate(); } catch (org.exolab.castor.xml.ValidationException vex) { return false; } return true; } //-- boolean isValid() /** * Method marshal * * * * @param out */ public void marshal(java.io.Writer out) throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { Marshaller.marshal(this, out); } //-- void marshal(java.io.Writer) /** * Method marshal * * * * @param handler */ public void marshal(org.xml.sax.ContentHandler handler) throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { Marshaller.marshal(this, handler); } //-- void marshal(org.xml.sax.ContentHandler) /** * Method unmarshal * * * * @param reader * @return Object */ public static java.lang.Object unmarshal(java.io.Reader reader) throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { return (jalview.binding.Sequence) Unmarshaller.unmarshal(jalview.binding.Sequence.class, reader); } //-- java.lang.Object unmarshal(java.io.Reader) /** * Method validate * */ public void validate() throws org.exolab.castor.xml.ValidationException { org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator(); validator.validate(this); } //-- void validate() }