/*
* Jalview - A Sequence Alignment Editor and Viewer
* Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
*
* This program is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with this program; if not, write to the Free Software
* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA
*/
package jalview.datamodel;

import java.awt.*;


public class Annotation {
    public String displayCharacter = "";
    public String description = ""; // currently used as mouse over
    public char secondaryStructure = ' '; // recognises H and E
    public float value;

    // add visual cues here
    public Color colour = Color.black;

    public Annotation(String displayChar, String desc, char ss, float val) {
        displayCharacter = displayChar;
        description = desc;
        secondaryStructure = ss;
        value = val;
    }

    public Annotation(String displayChar, String desc, char ss, float val,
        Color colour) {
        this(displayChar, desc, ss, val);
        this.colour = colour;
    }
}