/* * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) * Copyright (C) $$Year-Rel$$ The Jalview Authors * * This file is part of Jalview. * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License * as published by the Free Software Foundation, either version 3 * of the License, or (at your option) any later version. * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR * PURPOSE. See the GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with Jalview. If not, see . * The Jalview Authors are detailed in the 'AUTHORS' file. */ package jalview.datamodel; /** * A bean that models a point with (x, y, z) coordinates and a reference to a * sequence */ public class SequencePoint { /* * Associated alignment sequence, or dummy sequence object */ private final SequenceI sequence; /* * array of coordinates in embedded sequence space */ public float[] coord; /** * Constructor * * @param sequence * @param coord */ public SequencePoint(SequenceI sequence, float[] coord) { this.sequence = sequence; this.coord = coord; } public SequenceI getSequence() { return sequence; } }