package jalview.ext.forester.io;

import jalview.api.FeatureSettingsModelI;
import jalview.datamodel.AlignmentI;
import jalview.datamodel.SequenceI;
import jalview.io.AlignmentFileReaderI;
import jalview.io.DataSourceType;
import jalview.io.FileParse;

public class ForesterReader implements AlignmentFileReaderI
{

  public ForesterReader(FileParse source)
  {
    // if (source.getDataSourceType() == DataSourceType.URL)
    // {
    // ParserUtils.createParserDependingOnUrlContents(url,
    // AptxInit.APTX_CONFIG.isValidatePhyloXmlAgainstSchema());
    //
    // }
    // else
    // {
    // ParserUtils.createParserDependingOnFileType(file,
    // AptxInit.APTX_CONFIG.isValidatePhyloXmlAgainstSchema());
    // }
  }

  @Override
  public SequenceI[] getSeqsAsArray()
  {
    // TODO Auto-generated method stub
    return null;
  }

  @Override
  public void addAnnotations(AlignmentI al)
  {
    // TODO Auto-generated method stub

  }

  @Override
  public void addGroups(AlignmentI al)
  {
    // TODO Auto-generated method stub

  }

  @Override
  public void setSeqs(SequenceI[] sequencesArray)
  {
    // TODO Auto-generated method stub

  }

  @Override
  public boolean hasWarningMessage()
  {
    // TODO Auto-generated method stub
    return false;
  }

  @Override
  public String getWarningMessage()
  {
    // TODO Auto-generated method stub
    return null;
  }

  @Override
  public String getInFile()
  {
    // TODO Auto-generated method stub
    return null;
  }

  @Override
  public DataSourceType getDataSourceType()
  {
    // TODO Auto-generated method stub
    return null;
  }

  @Override
  public FeatureSettingsModelI getFeatureColourScheme()
  {
    // TODO Auto-generated method stub
    return null;
  }

}