package jalview.gui;

import jalview.datamodel.PDBEntry;
import jalview.datamodel.SequenceI;
import jalview.gui.StructureViewer.ViewerType;

/**
 * A class for the gui frame through which Jalview interacts with the ChimeraX
 * structure viewer. Mostly the same as ChimeraViewFrame with a few overrides
 * for the differences.
 * 
 * @author gmcarstairs
 *
 */
public class ChimeraXViewFrame extends ChimeraViewFrame
{

  public ChimeraXViewFrame(PDBEntry pdb, SequenceI[] seqsForPdb,
          String[] chains, AlignmentPanel ap)
  {
    super(pdb, seqsForPdb, chains, ap);
  }

  public ChimeraXViewFrame(PDBEntry[] pdbsForFile, boolean superposeAdded,
          SequenceI[][] theSeqs, AlignmentPanel ap)
  {
    super(pdbsForFile, superposeAdded, theSeqs, ap);
  }

  /**
   * Constructor given a session file to be loaded
   * 
   * @param chimeraSessionFile
   * @param alignPanel
   * @param pdbArray
   * @param seqsArray
   * @param colourByChimera
   * @param colourBySequence
   * @param newViewId
   */
  public ChimeraXViewFrame(String chimeraSessionFile,
          AlignmentPanel alignPanel, PDBEntry[] pdbArray,
          SequenceI[][] seqsArray, boolean colourByChimera,
          boolean colourBySequence, String newViewId)
  {
    super(chimeraSessionFile, alignPanel, pdbArray, seqsArray,
            colourByChimera, colourBySequence, newViewId);
  }

  @Override
  public ViewerType getViewerType()
  {
    return ViewerType.CHIMERAX;
  }

  @Override
  protected String getViewerName()
  {
    return "ChimeraX";
  }

  @Override
  protected JalviewChimeraBindingModel newBindingModel(AlignmentPanel ap,
          PDBEntry[] pdbentrys, SequenceI[][] seqs)
  {
    return new JalviewChimeraXBindingModel(this,
            ap.getStructureSelectionManager(), pdbentrys, seqs, null);
  }
}