/* * Jalview - A Sequence Alignment Editor and Viewer * Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle * * This program is free software; you can redistribute it and/or * modify it under the terms of the GNU General Public License * as published by the Free Software Foundation; either version 2 * of the License, or (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program; if not, write to the Free Software * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA */ package jalview.io; import java.io.*; import java.net.*; public class FileParse { public File inFile; public int fileSize; public int noLines; protected String type; protected BufferedReader dataIn; public FileParse() { } public FileParse(String fileStr, String type) throws MalformedURLException, IOException { this.type = type; if (type.equals("File")) { this.inFile = new File(fileStr); this.fileSize = (int) inFile.length(); dataIn = new BufferedReader(new FileReader(fileStr)); } else if (type.equals("URL")) { URL url = new URL(fileStr); this.fileSize = 0; dataIn = new BufferedReader(new InputStreamReader(url.openStream())); } else if (type.equals("Paste")) { dataIn = new BufferedReader(new StringReader(fileStr)); } } public String nextLine() throws IOException { String next = dataIn.readLine(); if (next != null) { noLines++; } return next; } }