/********************
 * 2004 Jalview Reengineered
 * Barton Group
 * Dundee University
 *
 * AM Waterhouse
 *******************/

package jalview.jbgui;

import java.awt.*;
import javax.swing.*;

public class GAlignmentPanel extends JPanel
{
  protected JPanel sequenceHolderPanel = new JPanel();
  protected JScrollBar vscroll = new JScrollBar();
  protected  JScrollBar hscroll = new JScrollBar();
  protected JPanel seqPanelHolder = new JPanel();
  BorderLayout borderLayout1 = new BorderLayout();
  BorderLayout borderLayout3 = new BorderLayout();
  JPanel jPanel2 = new JPanel();
  BorderLayout borderLayout2 = new BorderLayout();
  protected JPanel scorePanelHolder = new JPanel();
  protected JPanel scalePanelHolder = new JPanel();
  protected JPanel idPanelHolder = new JPanel();
  BorderLayout borderLayout5 = new BorderLayout();
  protected JPanel idSpaceFillerPanel1 = new JPanel();
  protected JPanel idSpaceFillerPanel = new JPanel();
  BorderLayout borderLayout4 = new BorderLayout();
  BorderLayout borderLayout6 = new BorderLayout();
  ButtonGroup buttonGroup1 = new ButtonGroup();
  BorderLayout borderLayout7 = new BorderLayout();
  JPanel jPanel3 = new JPanel();
  protected JPanel secondaryPanelHolder = new JPanel();
  BorderLayout borderLayout8 = new BorderLayout();
  BorderLayout borderLayout9 = new BorderLayout();
  JPanel jPanel1 = new JPanel();
  BorderLayout borderLayout10 = new BorderLayout();
  protected JPanel hscrollFillerPanel = new JPanel();

  public GAlignmentPanel()
  {
    try
    {
      jbInit();
    }
    catch(Exception e)
    {
      e.printStackTrace();
    }
  }
  private void jbInit() throws Exception
  {
    idPanelHolder.setBorder(null);
    idPanelHolder.setPreferredSize(new Dimension(70, 10));
    this.setLayout(borderLayout7);
    sequenceHolderPanel.setMaximumSize(new Dimension(2147483647, 2147483647));
    sequenceHolderPanel.setMinimumSize(new Dimension(150, 150));
    sequenceHolderPanel.setPreferredSize(new Dimension(150, 150));
    sequenceHolderPanel.setLayout(borderLayout3);
    seqPanelHolder.setLayout(borderLayout1);
    jPanel2.setBackground(new Color(212, 208, 230));
    jPanel2.setBorder(null);
    jPanel2.setLayout(borderLayout2);
    scalePanelHolder.setBackground(Color.white);
    scalePanelHolder.setMinimumSize(new Dimension(10, 80));
    scalePanelHolder.setPreferredSize(new Dimension(10, 30));
    scalePanelHolder.setLayout(borderLayout6);
    scorePanelHolder.setBackground(Color.white);
    scorePanelHolder.setPreferredSize(new Dimension(10, 80));
    scorePanelHolder.setLayout(borderLayout4);
    idPanelHolder.setLayout(borderLayout5);
    idSpaceFillerPanel1.setBackground(Color.white);
    idSpaceFillerPanel1.setPreferredSize(new Dimension(10, 30));
    idSpaceFillerPanel.setBackground(Color.white);
    idSpaceFillerPanel.setPreferredSize(new Dimension(10, 80));
    hscroll.setOrientation(JScrollBar.HORIZONTAL);
    jPanel3.setLayout(borderLayout9);
    secondaryPanelHolder.setLayout(borderLayout8);
    jPanel1.setLayout(borderLayout10);
    hscrollFillerPanel.setBackground(Color.white);
    sequenceHolderPanel.add(scalePanelHolder,  BorderLayout.NORTH);
    sequenceHolderPanel.add(seqPanelHolder,  BorderLayout.CENTER);
    seqPanelHolder.add(vscroll, BorderLayout.EAST);
    this.add(jPanel2, BorderLayout.CENTER);
    jPanel2.add(sequenceHolderPanel, BorderLayout.CENTER);
    sequenceHolderPanel.add(jPanel3,  BorderLayout.SOUTH);
    jPanel3.add(scorePanelHolder, BorderLayout.CENTER);
  //  jPanel3.add(secondaryPanelHolder,  BorderLayout.SOUTH);
    this.add(idPanelHolder, BorderLayout.WEST);
    idPanelHolder.add(idSpaceFillerPanel1,  BorderLayout.NORTH);
    idPanelHolder.add(idSpaceFillerPanel,  BorderLayout.SOUTH);
    this.add(jPanel1,  BorderLayout.SOUTH);
    jPanel1.add(hscroll, BorderLayout.CENTER);
    jPanel1.add(hscrollFillerPanel,  BorderLayout.WEST);
  }


}