/*
* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
* Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
* Jalview is free software: you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation, either version 3
* of the License, or (at your option) any later version.
*
* Jalview is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty
* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
* PURPOSE. See the GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with Jalview. If not, see .
* The Jalview Authors are detailed in the 'AUTHORS' file.
*/
package jalview.jbgui;
import jalview.datamodel.AlignmentI;
import jalview.io.DataSourceType;
import jalview.io.FileFormat;
import jalview.io.FormatAdapter;
import jalview.io.cache.JvCacheableInputBox;
import jalview.util.MessageManager;
import java.awt.BorderLayout;
import java.awt.Dimension;
import java.awt.Font;
import java.awt.GridLayout;
import java.awt.Insets;
import java.awt.event.ActionEvent;
import java.awt.event.KeyEvent;
import javax.swing.JButton;
import javax.swing.JCheckBox;
import javax.swing.JLabel;
import javax.swing.JPanel;
import javax.swing.SwingConstants;
import javax.swing.SwingUtilities;
import javax.swing.event.CaretEvent;
import javax.swing.event.CaretListener;
public class GFinder extends JPanel
{
private static final java.awt.Font VERDANA_12 = new java.awt.Font("Verdana", 0,
12);
private static final String FINDER_CACHE_KEY = "CACHE.FINDER";
protected JButton createFeatures = new JButton();
protected JvCacheableInputBox searchBox = new JvCacheableInputBox<>(
getCacheKey());
protected JCheckBox caseSensitive = new JCheckBox();
protected JCheckBox searchDescription = new JCheckBox();
public GFinder()
{
try
{
jbInit();
} catch (Exception e)
{
e.printStackTrace();
}
}
private void jbInit() throws Exception
{
BorderLayout mainBorderLayout = new BorderLayout();
this.setLayout(mainBorderLayout);
mainBorderLayout.setHgap(5);
mainBorderLayout.setVgap(5);
JLabel jLabelFind = new JLabel(MessageManager.getString("label.find"));
jLabelFind.setFont(VERDANA_12);
JButton findAll = new JButton(
MessageManager.getString("action.find_all"));
findAll.setFont(VERDANA_12);
findAll.addActionListener(new java.awt.event.ActionListener()
{
@Override
public void actionPerformed(ActionEvent e)
{
findAll_actionPerformed();
}
});
JButton findNext = new JButton(
MessageManager.getString("action.find_next"));
findNext.setFont(VERDANA_12);
findNext.addActionListener(new java.awt.event.ActionListener()
{
@Override
public void actionPerformed(ActionEvent e)
{
findNext_actionPerformed();
}
});
JPanel actionsPanel = new JPanel();
GridLayout gridLayout1 = new GridLayout();
actionsPanel.setLayout(gridLayout1);
gridLayout1.setHgap(0);
gridLayout1.setRows(3);
gridLayout1.setVgap(2);
createFeatures.setEnabled(false);
createFeatures.setFont(VERDANA_12);
createFeatures.setMargin(new Insets(0, 0, 0, 0));
createFeatures.setText(MessageManager.getString("label.new_feature"));
createFeatures.addActionListener(new java.awt.event.ActionListener()
{
@Override
public void actionPerformed(ActionEvent e)
{
createFeatures_actionPerformed();
}
});
searchBox.getComponent()
.setFont(new java.awt.Font("Verdana", Font.PLAIN, 12));
searchBox.addCaretListener(new CaretListener()
{
@Override
public void caretUpdate(CaretEvent e)
{
textfield_caretUpdate();
}
});
searchBox.addKeyListener(new java.awt.event.KeyAdapter()
{
@Override
public void keyPressed(KeyEvent e)
{
textfield_keyPressed(e);
}
});
caseSensitive.setHorizontalAlignment(SwingConstants.LEFT);
caseSensitive.setText(MessageManager.getString("label.match_case"));
searchDescription
.setText(MessageManager.getString("label.include_description"));
actionsPanel.add(findNext, null);
actionsPanel.add(findAll, null);
actionsPanel.add(createFeatures, null);
this.add(jLabelFind, java.awt.BorderLayout.WEST);
this.add(actionsPanel, java.awt.BorderLayout.EAST);
JPanel jPanel2 = new JPanel();
jPanel2.setPreferredSize(new Dimension(10, 1));
JPanel jPanel3 = new JPanel();
jPanel3.setPreferredSize(new Dimension(10, 1));
JPanel jPanel4 = new JPanel();
jPanel4.setLayout(new BorderLayout());
this.add(jPanel2, java.awt.BorderLayout.SOUTH);
this.add(jPanel3, java.awt.BorderLayout.NORTH);
this.add(jPanel4, java.awt.BorderLayout.CENTER);
jPanel4.add(searchBox.getComponent(), java.awt.BorderLayout.NORTH);
JPanel optionsPanel = new JPanel();
GridLayout optionsGridLayout = new GridLayout();
optionsGridLayout.setHgap(0);
optionsGridLayout.setRows(2);
optionsGridLayout.setVgap(2);
optionsPanel.setLayout(optionsGridLayout);
optionsPanel.add(caseSensitive, null);
optionsPanel.add(searchDescription, null);
jPanel4.add(optionsPanel, java.awt.BorderLayout.WEST);
}
protected void textfield_keyPressed(KeyEvent e)
{
if (e.getKeyCode() == KeyEvent.VK_ENTER)
{
if (!searchBox.isPopupVisible())
{
e.consume();
findNext_actionPerformed();
}
}
}
protected void findNext_actionPerformed()
{
}
protected void findAll_actionPerformed()
{
}
public void createFeatures_actionPerformed()
{
}
public void textfield_caretUpdate()
{
// disabled as appears to be running a non-functional
if (false && searchBox.getUserInput().indexOf(">") > -1)
{
SwingUtilities.invokeLater(new Runnable()
{
@Override
public void run()
{
String str = searchBox.getUserInput();
AlignmentI al = null;
try
{
al = new FormatAdapter().readFile(str, DataSourceType.PASTE,
FileFormat.Fasta);
} catch (Exception ex)
{
}
if (al != null && al.getHeight() > 0)
{
str = jalview.analysis.AlignSeq.extractGaps(
jalview.util.Comparison.GapChars,
al.getSequenceAt(0).getSequenceAsString());
// todo and what? set str as searchBox text?
}
}
});
}
}
/**
* Returns unique key used for storing Finder cache items in the cache data
* structure
*
* @return
*/
public String getCacheKey()
{
return FINDER_CACHE_KEY;
}
}