/* * This class was automatically generated with * Castor 0.9.6, using an XML * Schema. * $Id$ */ package jalview.schemabinding.version2; //---------------------------------/ //- Imported classes and packages -/ //---------------------------------/ import org.exolab.castor.xml.validators.*; /** * Class JSeqDescriptor. * * @version $Revision$ $Date$ */ public class JSeqDescriptor extends org.exolab.castor.xml.util.XMLClassDescriptorImpl { //--------------------------/ //- Class/Member Variables -/ //--------------------------/ /** * Field nsPrefix */ private java.lang.String nsPrefix; /** * Field nsURI */ private java.lang.String nsURI; /** * Field xmlName */ private java.lang.String xmlName; /** * Field identity */ private org.exolab.castor.xml.XMLFieldDescriptor identity; //----------------/ //- Constructors -/ //----------------/ public JSeqDescriptor() { super(); nsURI = "www.jalview.org"; xmlName = "JSeq"; //-- set grouping compositor setCompositorAsSequence(); org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null; org.exolab.castor.xml.XMLFieldHandler handler = null; org.exolab.castor.xml.FieldValidator fieldValidator = null; //-- initialize attribute descriptors //-- _colour desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. Integer.TYPE, "_colour", "colour", org.exolab.castor.xml.NodeType.Attribute); handler = (new org.exolab.castor.xml.XMLFieldHandler() { public java.lang.Object getValue(java.lang.Object object) throws IllegalStateException { JSeq target = (JSeq) object; if (!target.hasColour()) { return null; } return new java.lang.Integer(target.getColour()); } public void setValue(java.lang.Object object, java.lang.Object value) throws IllegalStateException, IllegalArgumentException { try { JSeq target = (JSeq) object; // if null, use delete method for optional primitives if (value == null) { target.deleteColour(); return; } target.setColour( ( (java.lang.Integer) value).intValue()); } catch (java.lang.Exception ex) { throw new IllegalStateException(ex.toString()); } } public java.lang.Object newInstance(java.lang.Object parent) { return null; } }); desc.setHandler(handler); addFieldDescriptor(desc); //-- validation code for: _colour fieldValidator = new org.exolab.castor.xml.FieldValidator(); { //-- local scope IntegerValidator typeValidator = new IntegerValidator(); fieldValidator.setValidator(typeValidator); } desc.setValidator(fieldValidator); //-- _start desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. Integer.TYPE, "_start", "start", org.exolab.castor.xml.NodeType.Attribute); handler = (new org.exolab.castor.xml.XMLFieldHandler() { public java.lang.Object getValue(java.lang.Object object) throws IllegalStateException { JSeq target = (JSeq) object; if (!target.hasStart()) { return null; } return new java.lang.Integer(target.getStart()); } public void setValue(java.lang.Object object, java.lang.Object value) throws IllegalStateException, IllegalArgumentException { try { JSeq target = (JSeq) object; // ignore null values for non optional primitives if (value == null) { return; } target.setStart( ( (java.lang.Integer) value).intValue()); } catch (java.lang.Exception ex) { throw new IllegalStateException(ex.toString()); } } public java.lang.Object newInstance(java.lang.Object parent) { return null; } }); desc.setHandler(handler); desc.setRequired(true); addFieldDescriptor(desc); //-- validation code for: _start fieldValidator = new org.exolab.castor.xml.FieldValidator(); fieldValidator.setMinOccurs(1); { //-- local scope IntegerValidator typeValidator = new IntegerValidator(); fieldValidator.setValidator(typeValidator); } desc.setValidator(fieldValidator); //-- _end desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. Integer.TYPE, "_end", "end", org.exolab.castor.xml.NodeType.Attribute); handler = (new org.exolab.castor.xml.XMLFieldHandler() { public java.lang.Object getValue(java.lang.Object object) throws IllegalStateException { JSeq target = (JSeq) object; if (!target.hasEnd()) { return null; } return new java.lang.Integer(target.getEnd()); } public void setValue(java.lang.Object object, java.lang.Object value) throws IllegalStateException, IllegalArgumentException { try { JSeq target = (JSeq) object; // ignore null values for non optional primitives if (value == null) { return; } target.setEnd( ( (java.lang.Integer) value).intValue()); } catch (java.lang.Exception ex) { throw new IllegalStateException(ex.toString()); } } public java.lang.Object newInstance(java.lang.Object parent) { return null; } }); desc.setHandler(handler); desc.setRequired(true); addFieldDescriptor(desc); //-- validation code for: _end fieldValidator = new org.exolab.castor.xml.FieldValidator(); fieldValidator.setMinOccurs(1); { //-- local scope IntegerValidator typeValidator = new IntegerValidator(); fieldValidator.setValidator(typeValidator); } desc.setValidator(fieldValidator); //-- _id desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. Integer.TYPE, "_id", "id", org.exolab.castor.xml.NodeType.Attribute); handler = (new org.exolab.castor.xml.XMLFieldHandler() { public java.lang.Object getValue(java.lang.Object object) throws IllegalStateException { JSeq target = (JSeq) object; if (!target.hasId()) { return null; } return new java.lang.Integer(target.getId()); } public void setValue(java.lang.Object object, java.lang.Object value) throws IllegalStateException, IllegalArgumentException { try { JSeq target = (JSeq) object; // ignore null values for non optional primitives if (value == null) { return; } target.setId( ( (java.lang.Integer) value).intValue()); } catch (java.lang.Exception ex) { throw new IllegalStateException(ex.toString()); } } public java.lang.Object newInstance(java.lang.Object parent) { return null; } }); desc.setHandler(handler); desc.setRequired(true); addFieldDescriptor(desc); //-- validation code for: _id fieldValidator = new org.exolab.castor.xml.FieldValidator(); fieldValidator.setMinOccurs(1); { //-- local scope IntegerValidator typeValidator = new IntegerValidator(); fieldValidator.setValidator(typeValidator); } desc.setValidator(fieldValidator); //-- _hidden desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. Boolean.TYPE, "_hidden", "hidden", org.exolab.castor.xml.NodeType.Attribute); handler = (new org.exolab.castor.xml.XMLFieldHandler() { public java.lang.Object getValue(java.lang.Object object) throws IllegalStateException { JSeq target = (JSeq) object; if (!target.hasHidden()) { return null; } return (target.getHidden() ? java.lang.Boolean.TRUE : java.lang.Boolean.FALSE); } public void setValue(java.lang.Object object, java.lang.Object value) throws IllegalStateException, IllegalArgumentException { try { JSeq target = (JSeq) object; // if null, use delete method for optional primitives if (value == null) { target.deleteHidden(); return; } target.setHidden( ( (java.lang.Boolean) value).booleanValue()); } catch (java.lang.Exception ex) { throw new IllegalStateException(ex.toString()); } } public java.lang.Object newInstance(java.lang.Object parent) { return null; } }); desc.setHandler(handler); addFieldDescriptor(desc); //-- validation code for: _hidden fieldValidator = new org.exolab.castor.xml.FieldValidator(); { //-- local scope BooleanValidator typeValidator = new BooleanValidator(); fieldValidator.setValidator(typeValidator); } desc.setValidator(fieldValidator); //-- initialize element descriptors //-- _featuresList desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview. schemabinding.version2.Features.class, "_featuresList", "features", org.exolab.castor.xml.NodeType.Element); handler = (new org.exolab.castor.xml.XMLFieldHandler() { public java.lang.Object getValue(java.lang.Object object) throws IllegalStateException { JSeq target = (JSeq) object; return target.getFeatures(); } public void setValue(java.lang.Object object, java.lang.Object value) throws IllegalStateException, IllegalArgumentException { try { JSeq target = (JSeq) object; target.addFeatures( (jalview.schemabinding.version2.Features) value); } catch (java.lang.Exception ex) { throw new IllegalStateException(ex.toString()); } } public java.lang.Object newInstance(java.lang.Object parent) { return new jalview.schemabinding.version2.Features(); } }); desc.setHandler(handler); desc.setNameSpaceURI("www.jalview.org"); desc.setMultivalued(true); addFieldDescriptor(desc); //-- validation code for: _featuresList fieldValidator = new org.exolab.castor.xml.FieldValidator(); fieldValidator.setMinOccurs(0); { //-- local scope } desc.setValidator(fieldValidator); //-- _pdbidsList desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(jalview. schemabinding.version2.Pdbids.class, "_pdbidsList", "pdbids", org.exolab.castor.xml.NodeType.Element); handler = (new org.exolab.castor.xml.XMLFieldHandler() { public java.lang.Object getValue(java.lang.Object object) throws IllegalStateException { JSeq target = (JSeq) object; return target.getPdbids(); } public void setValue(java.lang.Object object, java.lang.Object value) throws IllegalStateException, IllegalArgumentException { try { JSeq target = (JSeq) object; target.addPdbids( (jalview.schemabinding.version2.Pdbids) value); } catch (java.lang.Exception ex) { throw new IllegalStateException(ex.toString()); } } public java.lang.Object newInstance(java.lang.Object parent) { return new jalview.schemabinding.version2.Pdbids(); } }); desc.setHandler(handler); desc.setNameSpaceURI("www.jalview.org"); desc.setMultivalued(true); addFieldDescriptor(desc); //-- validation code for: _pdbidsList fieldValidator = new org.exolab.castor.xml.FieldValidator(); fieldValidator.setMinOccurs(0); { //-- local scope } desc.setValidator(fieldValidator); //-- _hiddenSequencesList desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(java.lang. Integer.TYPE, "_hiddenSequencesList", "hiddenSequences", org.exolab.castor.xml.NodeType.Element); handler = (new org.exolab.castor.xml.XMLFieldHandler() { public java.lang.Object getValue(java.lang.Object object) throws IllegalStateException { JSeq target = (JSeq) object; return target.getHiddenSequences(); } public void setValue(java.lang.Object object, java.lang.Object value) throws IllegalStateException, IllegalArgumentException { try { JSeq target = (JSeq) object; // ignore null values for non optional primitives if (value == null) { return; } target.addHiddenSequences( ( (java.lang.Integer) value).intValue()); } catch (java.lang.Exception ex) { throw new IllegalStateException(ex.toString()); } } public java.lang.Object newInstance(java.lang.Object parent) { return null; } }); desc.setHandler(handler); desc.setNameSpaceURI("www.jalview.org"); desc.setMultivalued(true); addFieldDescriptor(desc); //-- validation code for: _hiddenSequencesList fieldValidator = new org.exolab.castor.xml.FieldValidator(); fieldValidator.setMinOccurs(0); { //-- local scope IntegerValidator typeValidator = new IntegerValidator(); fieldValidator.setValidator(typeValidator); } desc.setValidator(fieldValidator); } //-- jalview.schemabinding.version2.JSeqDescriptor() //-----------/ //- Methods -/ //-----------/ /** * Method getAccessMode * * * * @return AccessMode */ public org.exolab.castor.mapping.AccessMode getAccessMode() { return null; } //-- org.exolab.castor.mapping.AccessMode getAccessMode() /** * Method getExtends * * * * @return ClassDescriptor */ public org.exolab.castor.mapping.ClassDescriptor getExtends() { return null; } //-- org.exolab.castor.mapping.ClassDescriptor getExtends() /** * Method getIdentity * * * * @return FieldDescriptor */ public org.exolab.castor.mapping.FieldDescriptor getIdentity() { return identity; } //-- org.exolab.castor.mapping.FieldDescriptor getIdentity() /** * Method getJavaClass * * * * @return Class */ public java.lang.Class getJavaClass() { return jalview.schemabinding.version2.JSeq.class; } //-- java.lang.Class getJavaClass() /** * Method getNameSpacePrefix * * * * @return String */ public java.lang.String getNameSpacePrefix() { return nsPrefix; } //-- java.lang.String getNameSpacePrefix() /** * Method getNameSpaceURI * * * * @return String */ public java.lang.String getNameSpaceURI() { return nsURI; } //-- java.lang.String getNameSpaceURI() /** * Method getValidator * * * * @return TypeValidator */ public org.exolab.castor.xml.TypeValidator getValidator() { return this; } //-- org.exolab.castor.xml.TypeValidator getValidator() /** * Method getXMLName * * * * @return String */ public java.lang.String getXMLName() { return xmlName; } //-- java.lang.String getXMLName() }