/*******************************************************************************
* Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
* Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle
*
* This file is part of Jalview.
*
* Jalview is free software: you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
*
* Jalview is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty
* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
* PURPOSE. See the GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License along with Jalview. If not, see
Note: Just in case the collection contents * are changing in another thread, we pass a 0-length Array of * the correct type into the API call. This way we know * that the Array returned is of exactly the correct length. * * @return this collection as an Array */ public java.lang.String[] getServiceURL( ) { java.lang.String[] array = new java.lang.String[0]; return (java.lang.String[]) this._serviceURLList.toArray(array); } /** * Method getServiceURLCount. * * @return the size of this collection */ public int getServiceURLCount( ) { return this._serviceURLList.size(); } /** * Returns the value of field 'version'. The field 'version' * has the following description: A Jalview Web Service * Parameter Set container * version number. * Version 1 created for storing Jaba user presets. * * * @return the value of field 'Version'. */ public java.lang.String getVersion( ) { return this._version; } /** * Method isValid. * * @return true if this object is valid according to the schema */ public boolean isValid( ) { try { validate(); } catch (org.exolab.castor.xml.ValidationException vex) { return false; } return true; } /** * * * @param out * @throws org.exolab.castor.xml.MarshalException if object is * null or if any SAXException is thrown during marshaling * @throws org.exolab.castor.xml.ValidationException if this * object is an invalid instance according to the schema */ public void marshal( final java.io.Writer out) throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { Marshaller.marshal(this, out); } /** * * * @param handler * @throws java.io.IOException if an IOException occurs during * marshaling * @throws org.exolab.castor.xml.ValidationException if this * object is an invalid instance according to the schema * @throws org.exolab.castor.xml.MarshalException if object is * null or if any SAXException is thrown during marshaling */ public void marshal( final org.xml.sax.ContentHandler handler) throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { Marshaller.marshal(this, handler); } /** */ public void removeAllServiceURL( ) { this._serviceURLList.clear(); } /** * Method removeServiceURL. * * @param vServiceURL * @return true if the object was removed from the collection. */ public boolean removeServiceURL( final java.lang.String vServiceURL) { boolean removed = _serviceURLList.remove(vServiceURL); return removed; } /** * Method removeServiceURLAt. * * @param index * @return the element removed from the collection */ public java.lang.String removeServiceURLAt( final int index) { java.lang.Object obj = this._serviceURLList.remove(index); return (java.lang.String) obj; } /** * Sets the value of field 'description'. The field * 'description' has the following description: Short * description - as utf8 encoded text. This is * usually displayed * in the body of an HTML capable tooltip, so HTML tags may be * embedded * using standard UTF8 encoding. * * * @param description the value of field 'description'. */ public void setDescription( final java.lang.String description) { this._description = description; } /** * Sets the value of field 'name'. The field 'name' has the * following description: The short name for the parameter set. * This will be shown amongst the * other presets for the web service. * * * @param name the value of field 'name'. */ public void setName( final java.lang.String name) { this._name = name; } /** * Sets the value of field 'parameters'. The field 'parameters' * has the following description: UTF8 encoded string to be * processed into a specific web services' * parameter set. Note - newlines may be important to the * structure * of this file. * * * @param parameters the value of field 'parameters'. */ public void setParameters( final java.lang.String parameters) { this._parameters = parameters; } /** * * * @param index * @param vServiceURL * @throws java.lang.IndexOutOfBoundsException if the index * given is outside the bounds of the collection */ public void setServiceURL( final int index, final java.lang.String vServiceURL) throws java.lang.IndexOutOfBoundsException { // check bounds for index if (index < 0 || index >= this._serviceURLList.size()) { throw new IndexOutOfBoundsException("setServiceURL: Index value '" + index + "' not in range [0.." + (this._serviceURLList.size() - 1) + "]"); } this._serviceURLList.set(index, vServiceURL); } /** * * * @param vServiceURLArray */ public void setServiceURL( final java.lang.String[] vServiceURLArray) { //-- copy array _serviceURLList.clear(); for (int i = 0; i < vServiceURLArray.length; i++) { this._serviceURLList.add(vServiceURLArray[i]); } } /** * Sets the value of field 'version'. The field 'version' has * the following description: A Jalview Web Service Parameter * Set container * version number. * Version 1 created for storing Jaba user presets. * * * @param version the value of field 'version'. */ public void setVersion( final java.lang.String version) { this._version = version; } /** * Method unmarshal. * * @param reader * @throws org.exolab.castor.xml.MarshalException if object is * null or if any SAXException is thrown during marshaling * @throws org.exolab.castor.xml.ValidationException if this * object is an invalid instance according to the schema * @return the unmarshaled * jalview.schemabinding.version2.WebServiceParameterSet */ public static jalview.schemabinding.version2.WebServiceParameterSet unmarshal( final java.io.Reader reader) throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { return (jalview.schemabinding.version2.WebServiceParameterSet) Unmarshaller.unmarshal(jalview.schemabinding.version2.WebServiceParameterSet.class, reader); } /** * * * @throws org.exolab.castor.xml.ValidationException if this * object is an invalid instance according to the schema */ public void validate( ) throws org.exolab.castor.xml.ValidationException { org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator(); validator.validate(this); } }