/*******************************************************************************
* Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.1)
* Copyright (C) 2014 The Jalview Authors
*
* This file is part of Jalview.
*
* Jalview is free software: you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
*
* Jalview is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty
* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
* PURPOSE. See the GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License along with Jalview.
* If not, see .
* The Jalview Authors are detailed in the 'AUTHORS' file.
******************************************************************************/
/*
* This class was automatically generated with
* Castor 1.1, using an XML
* Schema.
* $Id$
*/
package jalview.schemabinding.version2.descriptors;
//---------------------------------/
//- Imported classes and packages -/
//---------------------------------/
import jalview.schemabinding.version2.JGroup;
/**
* Class JGroupDescriptor.
*
* @version $Revision$ $Date$
*/
public class JGroupDescriptor extends
org.exolab.castor.xml.util.XMLClassDescriptorImpl
{
// --------------------------/
// - Class/Member Variables -/
// --------------------------/
/**
* Field _elementDefinition.
*/
private boolean _elementDefinition;
/**
* Field _nsPrefix.
*/
private java.lang.String _nsPrefix;
/**
* Field _nsURI.
*/
private java.lang.String _nsURI;
/**
* Field _xmlName.
*/
private java.lang.String _xmlName;
// ----------------/
// - Constructors -/
// ----------------/
public JGroupDescriptor()
{
super();
_nsURI = "www.jalview.org";
_xmlName = "JGroup";
_elementDefinition = true;
// -- set grouping compositor
setCompositorAsSequence();
org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;
org.exolab.castor.mapping.FieldHandler handler = null;
org.exolab.castor.xml.FieldValidator fieldValidator = null;
// -- initialize attribute descriptors
// -- _start
desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
java.lang.Integer.TYPE, "_start", "start",
org.exolab.castor.xml.NodeType.Attribute);
handler = new org.exolab.castor.xml.XMLFieldHandler()
{
public java.lang.Object getValue(java.lang.Object object)
throws IllegalStateException
{
JGroup target = (JGroup) object;
if (!target.hasStart())
{
return null;
}
return new java.lang.Integer(target.getStart());
}
public void setValue(java.lang.Object object, java.lang.Object value)
throws IllegalStateException, IllegalArgumentException
{
try
{
JGroup target = (JGroup) object;
// if null, use delete method for optional primitives
if (value == null)
{
target.deleteStart();
return;
}
target.setStart(((java.lang.Integer) value).intValue());
} catch (java.lang.Exception ex)
{
throw new IllegalStateException(ex.toString());
}
}
public java.lang.Object newInstance(java.lang.Object parent)
{
return null;
}
};
desc.setHandler(handler);
desc.setMultivalued(false);
addFieldDescriptor(desc);
// -- validation code for: _start
fieldValidator = new org.exolab.castor.xml.FieldValidator();
{ // -- local scope
org.exolab.castor.xml.validators.IntValidator typeValidator;
typeValidator = new org.exolab.castor.xml.validators.IntValidator();
fieldValidator.setValidator(typeValidator);
typeValidator.setMinInclusive(-2147483648);
typeValidator.setMaxInclusive(2147483647);
}
desc.setValidator(fieldValidator);
// -- _end
desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
java.lang.Integer.TYPE, "_end", "end",
org.exolab.castor.xml.NodeType.Attribute);
handler = new org.exolab.castor.xml.XMLFieldHandler()
{
public java.lang.Object getValue(java.lang.Object object)
throws IllegalStateException
{
JGroup target = (JGroup) object;
if (!target.hasEnd())
{
return null;
}
return new java.lang.Integer(target.getEnd());
}
public void setValue(java.lang.Object object, java.lang.Object value)
throws IllegalStateException, IllegalArgumentException
{
try
{
JGroup target = (JGroup) object;
// if null, use delete method for optional primitives
if (value == null)
{
target.deleteEnd();
return;
}
target.setEnd(((java.lang.Integer) value).intValue());
} catch (java.lang.Exception ex)
{
throw new IllegalStateException(ex.toString());
}
}
public java.lang.Object newInstance(java.lang.Object parent)
{
return null;
}
};
desc.setHandler(handler);
desc.setMultivalued(false);
addFieldDescriptor(desc);
// -- validation code for: _end
fieldValidator = new org.exolab.castor.xml.FieldValidator();
{ // -- local scope
org.exolab.castor.xml.validators.IntValidator typeValidator;
typeValidator = new org.exolab.castor.xml.validators.IntValidator();
fieldValidator.setValidator(typeValidator);
typeValidator.setMinInclusive(-2147483648);
typeValidator.setMaxInclusive(2147483647);
}
desc.setValidator(fieldValidator);
// -- _name
desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
java.lang.String.class, "_name", "name",
org.exolab.castor.xml.NodeType.Attribute);
desc.setImmutable(true);
handler = new org.exolab.castor.xml.XMLFieldHandler()
{
public java.lang.Object getValue(java.lang.Object object)
throws IllegalStateException
{
JGroup target = (JGroup) object;
return target.getName();
}
public void setValue(java.lang.Object object, java.lang.Object value)
throws IllegalStateException, IllegalArgumentException
{
try
{
JGroup target = (JGroup) object;
target.setName((java.lang.String) value);
} catch (java.lang.Exception ex)
{
throw new IllegalStateException(ex.toString());
}
}
public java.lang.Object newInstance(java.lang.Object parent)
{
return null;
}
};
desc.setHandler(handler);
desc.setMultivalued(false);
addFieldDescriptor(desc);
// -- validation code for: _name
fieldValidator = new org.exolab.castor.xml.FieldValidator();
{ // -- local scope
org.exolab.castor.xml.validators.StringValidator typeValidator;
typeValidator = new org.exolab.castor.xml.validators.StringValidator();
fieldValidator.setValidator(typeValidator);
typeValidator.setWhiteSpace("preserve");
}
desc.setValidator(fieldValidator);
// -- _colour
desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
java.lang.String.class, "_colour", "colour",
org.exolab.castor.xml.NodeType.Attribute);
desc.setImmutable(true);
handler = new org.exolab.castor.xml.XMLFieldHandler()
{
public java.lang.Object getValue(java.lang.Object object)
throws IllegalStateException
{
JGroup target = (JGroup) object;
return target.getColour();
}
public void setValue(java.lang.Object object, java.lang.Object value)
throws IllegalStateException, IllegalArgumentException
{
try
{
JGroup target = (JGroup) object;
target.setColour((java.lang.String) value);
} catch (java.lang.Exception ex)
{
throw new IllegalStateException(ex.toString());
}
}
public java.lang.Object newInstance(java.lang.Object parent)
{
return null;
}
};
desc.setHandler(handler);
desc.setMultivalued(false);
addFieldDescriptor(desc);
// -- validation code for: _colour
fieldValidator = new org.exolab.castor.xml.FieldValidator();
{ // -- local scope
org.exolab.castor.xml.validators.StringValidator typeValidator;
typeValidator = new org.exolab.castor.xml.validators.StringValidator();
fieldValidator.setValidator(typeValidator);
typeValidator.setWhiteSpace("preserve");
}
desc.setValidator(fieldValidator);
// -- _consThreshold
desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
java.lang.Integer.TYPE, "_consThreshold", "consThreshold",
org.exolab.castor.xml.NodeType.Attribute);
handler = new org.exolab.castor.xml.XMLFieldHandler()
{
public java.lang.Object getValue(java.lang.Object object)
throws IllegalStateException
{
JGroup target = (JGroup) object;
if (!target.hasConsThreshold())
{
return null;
}
return new java.lang.Integer(target.getConsThreshold());
}
public void setValue(java.lang.Object object, java.lang.Object value)
throws IllegalStateException, IllegalArgumentException
{
try
{
JGroup target = (JGroup) object;
// if null, use delete method for optional primitives
if (value == null)
{
target.deleteConsThreshold();
return;
}
target.setConsThreshold(((java.lang.Integer) value).intValue());
} catch (java.lang.Exception ex)
{
throw new IllegalStateException(ex.toString());
}
}
public java.lang.Object newInstance(java.lang.Object parent)
{
return null;
}
};
desc.setHandler(handler);
desc.setMultivalued(false);
addFieldDescriptor(desc);
// -- validation code for: _consThreshold
fieldValidator = new org.exolab.castor.xml.FieldValidator();
{ // -- local scope
org.exolab.castor.xml.validators.IntValidator typeValidator;
typeValidator = new org.exolab.castor.xml.validators.IntValidator();
fieldValidator.setValidator(typeValidator);
typeValidator.setMinInclusive(-2147483648);
typeValidator.setMaxInclusive(2147483647);
}
desc.setValidator(fieldValidator);
// -- _pidThreshold
desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
java.lang.Integer.TYPE, "_pidThreshold", "pidThreshold",
org.exolab.castor.xml.NodeType.Attribute);
handler = new org.exolab.castor.xml.XMLFieldHandler()
{
public java.lang.Object getValue(java.lang.Object object)
throws IllegalStateException
{
JGroup target = (JGroup) object;
if (!target.hasPidThreshold())
{
return null;
}
return new java.lang.Integer(target.getPidThreshold());
}
public void setValue(java.lang.Object object, java.lang.Object value)
throws IllegalStateException, IllegalArgumentException
{
try
{
JGroup target = (JGroup) object;
// if null, use delete method for optional primitives
if (value == null)
{
target.deletePidThreshold();
return;
}
target.setPidThreshold(((java.lang.Integer) value).intValue());
} catch (java.lang.Exception ex)
{
throw new IllegalStateException(ex.toString());
}
}
public java.lang.Object newInstance(java.lang.Object parent)
{
return null;
}
};
desc.setHandler(handler);
desc.setMultivalued(false);
addFieldDescriptor(desc);
// -- validation code for: _pidThreshold
fieldValidator = new org.exolab.castor.xml.FieldValidator();
{ // -- local scope
org.exolab.castor.xml.validators.IntValidator typeValidator;
typeValidator = new org.exolab.castor.xml.validators.IntValidator();
fieldValidator.setValidator(typeValidator);
typeValidator.setMinInclusive(-2147483648);
typeValidator.setMaxInclusive(2147483647);
}
desc.setValidator(fieldValidator);
// -- _outlineColour
desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
java.lang.Integer.TYPE, "_outlineColour", "outlineColour",
org.exolab.castor.xml.NodeType.Attribute);
handler = new org.exolab.castor.xml.XMLFieldHandler()
{
public java.lang.Object getValue(java.lang.Object object)
throws IllegalStateException
{
JGroup target = (JGroup) object;
if (!target.hasOutlineColour())
{
return null;
}
return new java.lang.Integer(target.getOutlineColour());
}
public void setValue(java.lang.Object object, java.lang.Object value)
throws IllegalStateException, IllegalArgumentException
{
try
{
JGroup target = (JGroup) object;
// if null, use delete method for optional primitives
if (value == null)
{
target.deleteOutlineColour();
return;
}
target.setOutlineColour(((java.lang.Integer) value).intValue());
} catch (java.lang.Exception ex)
{
throw new IllegalStateException(ex.toString());
}
}
public java.lang.Object newInstance(java.lang.Object parent)
{
return null;
}
};
desc.setHandler(handler);
desc.setMultivalued(false);
addFieldDescriptor(desc);
// -- validation code for: _outlineColour
fieldValidator = new org.exolab.castor.xml.FieldValidator();
{ // -- local scope
org.exolab.castor.xml.validators.IntValidator typeValidator;
typeValidator = new org.exolab.castor.xml.validators.IntValidator();
fieldValidator.setValidator(typeValidator);
typeValidator.setMinInclusive(-2147483648);
typeValidator.setMaxInclusive(2147483647);
}
desc.setValidator(fieldValidator);
// -- _displayBoxes
desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
java.lang.Boolean.TYPE, "_displayBoxes", "displayBoxes",
org.exolab.castor.xml.NodeType.Attribute);
handler = new org.exolab.castor.xml.XMLFieldHandler()
{
public java.lang.Object getValue(java.lang.Object object)
throws IllegalStateException
{
JGroup target = (JGroup) object;
if (!target.hasDisplayBoxes())
{
return null;
}
return (target.getDisplayBoxes() ? java.lang.Boolean.TRUE
: java.lang.Boolean.FALSE);
}
public void setValue(java.lang.Object object, java.lang.Object value)
throws IllegalStateException, IllegalArgumentException
{
try
{
JGroup target = (JGroup) object;
// if null, use delete method for optional primitives
if (value == null)
{
target.deleteDisplayBoxes();
return;
}
target.setDisplayBoxes(((java.lang.Boolean) value).booleanValue());
} catch (java.lang.Exception ex)
{
throw new IllegalStateException(ex.toString());
}
}
public java.lang.Object newInstance(java.lang.Object parent)
{
return null;
}
};
desc.setHandler(handler);
desc.setMultivalued(false);
addFieldDescriptor(desc);
// -- validation code for: _displayBoxes
fieldValidator = new org.exolab.castor.xml.FieldValidator();
{ // -- local scope
org.exolab.castor.xml.validators.BooleanValidator typeValidator;
typeValidator = new org.exolab.castor.xml.validators.BooleanValidator();
fieldValidator.setValidator(typeValidator);
}
desc.setValidator(fieldValidator);
// -- _displayText
desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
java.lang.Boolean.TYPE, "_displayText", "displayText",
org.exolab.castor.xml.NodeType.Attribute);
handler = new org.exolab.castor.xml.XMLFieldHandler()
{
public java.lang.Object getValue(java.lang.Object object)
throws IllegalStateException
{
JGroup target = (JGroup) object;
if (!target.hasDisplayText())
{
return null;
}
return (target.getDisplayText() ? java.lang.Boolean.TRUE
: java.lang.Boolean.FALSE);
}
public void setValue(java.lang.Object object, java.lang.Object value)
throws IllegalStateException, IllegalArgumentException
{
try
{
JGroup target = (JGroup) object;
// if null, use delete method for optional primitives
if (value == null)
{
target.deleteDisplayText();
return;
}
target.setDisplayText(((java.lang.Boolean) value).booleanValue());
} catch (java.lang.Exception ex)
{
throw new IllegalStateException(ex.toString());
}
}
public java.lang.Object newInstance(java.lang.Object parent)
{
return null;
}
};
desc.setHandler(handler);
desc.setMultivalued(false);
addFieldDescriptor(desc);
// -- validation code for: _displayText
fieldValidator = new org.exolab.castor.xml.FieldValidator();
{ // -- local scope
org.exolab.castor.xml.validators.BooleanValidator typeValidator;
typeValidator = new org.exolab.castor.xml.validators.BooleanValidator();
fieldValidator.setValidator(typeValidator);
}
desc.setValidator(fieldValidator);
// -- _colourText
desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
java.lang.Boolean.TYPE, "_colourText", "colourText",
org.exolab.castor.xml.NodeType.Attribute);
handler = new org.exolab.castor.xml.XMLFieldHandler()
{
public java.lang.Object getValue(java.lang.Object object)
throws IllegalStateException
{
JGroup target = (JGroup) object;
if (!target.hasColourText())
{
return null;
}
return (target.getColourText() ? java.lang.Boolean.TRUE
: java.lang.Boolean.FALSE);
}
public void setValue(java.lang.Object object, java.lang.Object value)
throws IllegalStateException, IllegalArgumentException
{
try
{
JGroup target = (JGroup) object;
// if null, use delete method for optional primitives
if (value == null)
{
target.deleteColourText();
return;
}
target.setColourText(((java.lang.Boolean) value).booleanValue());
} catch (java.lang.Exception ex)
{
throw new IllegalStateException(ex.toString());
}
}
public java.lang.Object newInstance(java.lang.Object parent)
{
return null;
}
};
desc.setHandler(handler);
desc.setMultivalued(false);
addFieldDescriptor(desc);
// -- validation code for: _colourText
fieldValidator = new org.exolab.castor.xml.FieldValidator();
{ // -- local scope
org.exolab.castor.xml.validators.BooleanValidator typeValidator;
typeValidator = new org.exolab.castor.xml.validators.BooleanValidator();
fieldValidator.setValidator(typeValidator);
}
desc.setValidator(fieldValidator);
// -- _textCol1
desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
java.lang.Integer.TYPE, "_textCol1", "textCol1",
org.exolab.castor.xml.NodeType.Attribute);
handler = new org.exolab.castor.xml.XMLFieldHandler()
{
public java.lang.Object getValue(java.lang.Object object)
throws IllegalStateException
{
JGroup target = (JGroup) object;
if (!target.hasTextCol1())
{
return null;
}
return new java.lang.Integer(target.getTextCol1());
}
public void setValue(java.lang.Object object, java.lang.Object value)
throws IllegalStateException, IllegalArgumentException
{
try
{
JGroup target = (JGroup) object;
// if null, use delete method for optional primitives
if (value == null)
{
target.deleteTextCol1();
return;
}
target.setTextCol1(((java.lang.Integer) value).intValue());
} catch (java.lang.Exception ex)
{
throw new IllegalStateException(ex.toString());
}
}
public java.lang.Object newInstance(java.lang.Object parent)
{
return null;
}
};
desc.setHandler(handler);
desc.setMultivalued(false);
addFieldDescriptor(desc);
// -- validation code for: _textCol1
fieldValidator = new org.exolab.castor.xml.FieldValidator();
{ // -- local scope
org.exolab.castor.xml.validators.IntValidator typeValidator;
typeValidator = new org.exolab.castor.xml.validators.IntValidator();
fieldValidator.setValidator(typeValidator);
typeValidator.setMinInclusive(-2147483648);
typeValidator.setMaxInclusive(2147483647);
}
desc.setValidator(fieldValidator);
// -- _textCol2
desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
java.lang.Integer.TYPE, "_textCol2", "textCol2",
org.exolab.castor.xml.NodeType.Attribute);
handler = new org.exolab.castor.xml.XMLFieldHandler()
{
public java.lang.Object getValue(java.lang.Object object)
throws IllegalStateException
{
JGroup target = (JGroup) object;
if (!target.hasTextCol2())
{
return null;
}
return new java.lang.Integer(target.getTextCol2());
}
public void setValue(java.lang.Object object, java.lang.Object value)
throws IllegalStateException, IllegalArgumentException
{
try
{
JGroup target = (JGroup) object;
// if null, use delete method for optional primitives
if (value == null)
{
target.deleteTextCol2();
return;
}
target.setTextCol2(((java.lang.Integer) value).intValue());
} catch (java.lang.Exception ex)
{
throw new IllegalStateException(ex.toString());
}
}
public java.lang.Object newInstance(java.lang.Object parent)
{
return null;
}
};
desc.setHandler(handler);
desc.setMultivalued(false);
addFieldDescriptor(desc);
// -- validation code for: _textCol2
fieldValidator = new org.exolab.castor.xml.FieldValidator();
{ // -- local scope
org.exolab.castor.xml.validators.IntValidator typeValidator;
typeValidator = new org.exolab.castor.xml.validators.IntValidator();
fieldValidator.setValidator(typeValidator);
typeValidator.setMinInclusive(-2147483648);
typeValidator.setMaxInclusive(2147483647);
}
desc.setValidator(fieldValidator);
// -- _textColThreshold
desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
java.lang.Integer.TYPE, "_textColThreshold",
"textColThreshold", org.exolab.castor.xml.NodeType.Attribute);
handler = new org.exolab.castor.xml.XMLFieldHandler()
{
public java.lang.Object getValue(java.lang.Object object)
throws IllegalStateException
{
JGroup target = (JGroup) object;
if (!target.hasTextColThreshold())
{
return null;
}
return new java.lang.Integer(target.getTextColThreshold());
}
public void setValue(java.lang.Object object, java.lang.Object value)
throws IllegalStateException, IllegalArgumentException
{
try
{
JGroup target = (JGroup) object;
// if null, use delete method for optional primitives
if (value == null)
{
target.deleteTextColThreshold();
return;
}
target.setTextColThreshold(((java.lang.Integer) value).intValue());
} catch (java.lang.Exception ex)
{
throw new IllegalStateException(ex.toString());
}
}
public java.lang.Object newInstance(java.lang.Object parent)
{
return null;
}
};
desc.setHandler(handler);
desc.setMultivalued(false);
addFieldDescriptor(desc);
// -- validation code for: _textColThreshold
fieldValidator = new org.exolab.castor.xml.FieldValidator();
{ // -- local scope
org.exolab.castor.xml.validators.IntValidator typeValidator;
typeValidator = new org.exolab.castor.xml.validators.IntValidator();
fieldValidator.setValidator(typeValidator);
typeValidator.setMinInclusive(-2147483648);
typeValidator.setMaxInclusive(2147483647);
}
desc.setValidator(fieldValidator);
// -- _showUnconserved
desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
java.lang.Boolean.TYPE, "_showUnconserved", "showUnconserved",
org.exolab.castor.xml.NodeType.Attribute);
handler = new org.exolab.castor.xml.XMLFieldHandler()
{
public java.lang.Object getValue(java.lang.Object object)
throws IllegalStateException
{
JGroup target = (JGroup) object;
if (!target.hasShowUnconserved())
{
return null;
}
return (target.getShowUnconserved() ? java.lang.Boolean.TRUE
: java.lang.Boolean.FALSE);
}
public void setValue(java.lang.Object object, java.lang.Object value)
throws IllegalStateException, IllegalArgumentException
{
try
{
JGroup target = (JGroup) object;
// if null, use delete method for optional primitives
if (value == null)
{
target.deleteShowUnconserved();
return;
}
target.setShowUnconserved(((java.lang.Boolean) value)
.booleanValue());
} catch (java.lang.Exception ex)
{
throw new IllegalStateException(ex.toString());
}
}
public java.lang.Object newInstance(java.lang.Object parent)
{
return null;
}
};
desc.setHandler(handler);
desc.setMultivalued(false);
addFieldDescriptor(desc);
// -- validation code for: _showUnconserved
fieldValidator = new org.exolab.castor.xml.FieldValidator();
{ // -- local scope
org.exolab.castor.xml.validators.BooleanValidator typeValidator;
typeValidator = new org.exolab.castor.xml.validators.BooleanValidator();
fieldValidator.setValidator(typeValidator);
}
desc.setValidator(fieldValidator);
// -- _ignoreGapsinConsensus
desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
java.lang.Boolean.TYPE, "_ignoreGapsinConsensus",
"ignoreGapsinConsensus",
org.exolab.castor.xml.NodeType.Attribute);
handler = new org.exolab.castor.xml.XMLFieldHandler()
{
public java.lang.Object getValue(java.lang.Object object)
throws IllegalStateException
{
JGroup target = (JGroup) object;
if (!target.hasIgnoreGapsinConsensus())
{
return null;
}
return (target.getIgnoreGapsinConsensus() ? java.lang.Boolean.TRUE
: java.lang.Boolean.FALSE);
}
public void setValue(java.lang.Object object, java.lang.Object value)
throws IllegalStateException, IllegalArgumentException
{
try
{
JGroup target = (JGroup) object;
// if null, use delete method for optional primitives
if (value == null)
{
target.deleteIgnoreGapsinConsensus();
return;
}
target.setIgnoreGapsinConsensus(((java.lang.Boolean) value)
.booleanValue());
} catch (java.lang.Exception ex)
{
throw new IllegalStateException(ex.toString());
}
}
public java.lang.Object newInstance(java.lang.Object parent)
{
return null;
}
};
desc.setHandler(handler);
desc.setMultivalued(false);
addFieldDescriptor(desc);
// -- validation code for: _ignoreGapsinConsensus
fieldValidator = new org.exolab.castor.xml.FieldValidator();
{ // -- local scope
org.exolab.castor.xml.validators.BooleanValidator typeValidator;
typeValidator = new org.exolab.castor.xml.validators.BooleanValidator();
fieldValidator.setValidator(typeValidator);
}
desc.setValidator(fieldValidator);
// -- _showConsensusHistogram
desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
java.lang.Boolean.TYPE, "_showConsensusHistogram",
"showConsensusHistogram",
org.exolab.castor.xml.NodeType.Attribute);
handler = new org.exolab.castor.xml.XMLFieldHandler()
{
public java.lang.Object getValue(java.lang.Object object)
throws IllegalStateException
{
JGroup target = (JGroup) object;
if (!target.hasShowConsensusHistogram())
{
return null;
}
return (target.getShowConsensusHistogram() ? java.lang.Boolean.TRUE
: java.lang.Boolean.FALSE);
}
public void setValue(java.lang.Object object, java.lang.Object value)
throws IllegalStateException, IllegalArgumentException
{
try
{
JGroup target = (JGroup) object;
// if null, use delete method for optional primitives
if (value == null)
{
target.deleteShowConsensusHistogram();
return;
}
target.setShowConsensusHistogram(((java.lang.Boolean) value)
.booleanValue());
} catch (java.lang.Exception ex)
{
throw new IllegalStateException(ex.toString());
}
}
public java.lang.Object newInstance(java.lang.Object parent)
{
return null;
}
};
desc.setHandler(handler);
desc.setMultivalued(false);
addFieldDescriptor(desc);
// -- validation code for: _showConsensusHistogram
fieldValidator = new org.exolab.castor.xml.FieldValidator();
{ // -- local scope
org.exolab.castor.xml.validators.BooleanValidator typeValidator;
typeValidator = new org.exolab.castor.xml.validators.BooleanValidator();
fieldValidator.setValidator(typeValidator);
}
desc.setValidator(fieldValidator);
// -- _showSequenceLogo
desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
java.lang.Boolean.TYPE, "_showSequenceLogo",
"showSequenceLogo", org.exolab.castor.xml.NodeType.Attribute);
handler = new org.exolab.castor.xml.XMLFieldHandler()
{
public java.lang.Object getValue(java.lang.Object object)
throws IllegalStateException
{
JGroup target = (JGroup) object;
if (!target.hasShowSequenceLogo())
{
return null;
}
return (target.getShowSequenceLogo() ? java.lang.Boolean.TRUE
: java.lang.Boolean.FALSE);
}
public void setValue(java.lang.Object object, java.lang.Object value)
throws IllegalStateException, IllegalArgumentException
{
try
{
JGroup target = (JGroup) object;
// if null, use delete method for optional primitives
if (value == null)
{
target.deleteShowSequenceLogo();
return;
}
target.setShowSequenceLogo(((java.lang.Boolean) value)
.booleanValue());
} catch (java.lang.Exception ex)
{
throw new IllegalStateException(ex.toString());
}
}
public java.lang.Object newInstance(java.lang.Object parent)
{
return null;
}
};
desc.setHandler(handler);
desc.setMultivalued(false);
addFieldDescriptor(desc);
// -- validation code for: _showSequenceLogo
fieldValidator = new org.exolab.castor.xml.FieldValidator();
{ // -- local scope
org.exolab.castor.xml.validators.BooleanValidator typeValidator;
typeValidator = new org.exolab.castor.xml.validators.BooleanValidator();
fieldValidator.setValidator(typeValidator);
}
desc.setValidator(fieldValidator);
// -- _normaliseSequenceLogo
desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
java.lang.Boolean.TYPE, "_normaliseSequenceLogo",
"normaliseSequenceLogo",
org.exolab.castor.xml.NodeType.Attribute);
handler = new org.exolab.castor.xml.XMLFieldHandler()
{
public java.lang.Object getValue(java.lang.Object object)
throws IllegalStateException
{
JGroup target = (JGroup) object;
if (!target.hasNormaliseSequenceLogo())
{
return null;
}
return (target.getNormaliseSequenceLogo() ? java.lang.Boolean.TRUE
: java.lang.Boolean.FALSE);
}
public void setValue(java.lang.Object object, java.lang.Object value)
throws IllegalStateException, IllegalArgumentException
{
try
{
JGroup target = (JGroup) object;
// if null, use delete method for optional primitives
if (value == null)
{
target.deleteNormaliseSequenceLogo();
return;
}
target.setNormaliseSequenceLogo(((java.lang.Boolean) value)
.booleanValue());
} catch (java.lang.Exception ex)
{
throw new IllegalStateException(ex.toString());
}
}
public java.lang.Object newInstance(java.lang.Object parent)
{
return null;
}
};
desc.setHandler(handler);
desc.setMultivalued(false);
addFieldDescriptor(desc);
// -- validation code for: _normaliseSequenceLogo
fieldValidator = new org.exolab.castor.xml.FieldValidator();
{ // -- local scope
org.exolab.castor.xml.validators.BooleanValidator typeValidator;
typeValidator = new org.exolab.castor.xml.validators.BooleanValidator();
fieldValidator.setValidator(typeValidator);
}
desc.setValidator(fieldValidator);
// -- _id
desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
java.lang.String.class, "_id", "id",
org.exolab.castor.xml.NodeType.Attribute);
desc.setImmutable(true);
handler = new org.exolab.castor.xml.XMLFieldHandler()
{
public java.lang.Object getValue(java.lang.Object object)
throws IllegalStateException
{
JGroup target = (JGroup) object;
return target.getId();
}
public void setValue(java.lang.Object object, java.lang.Object value)
throws IllegalStateException, IllegalArgumentException
{
try
{
JGroup target = (JGroup) object;
target.setId((java.lang.String) value);
} catch (java.lang.Exception ex)
{
throw new IllegalStateException(ex.toString());
}
}
public java.lang.Object newInstance(java.lang.Object parent)
{
return null;
}
};
desc.setHandler(handler);
desc.setMultivalued(false);
addFieldDescriptor(desc);
// -- validation code for: _id
fieldValidator = new org.exolab.castor.xml.FieldValidator();
{ // -- local scope
org.exolab.castor.xml.validators.StringValidator typeValidator;
typeValidator = new org.exolab.castor.xml.validators.StringValidator();
fieldValidator.setValidator(typeValidator);
typeValidator.setWhiteSpace("preserve");
}
desc.setValidator(fieldValidator);
// -- initialize element descriptors
// -- _seqList
desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
java.lang.String.class, "_seqList", "seq",
org.exolab.castor.xml.NodeType.Element);
desc.setImmutable(true);
handler = new org.exolab.castor.xml.XMLFieldHandler()
{
public java.lang.Object getValue(java.lang.Object object)
throws IllegalStateException
{
JGroup target = (JGroup) object;
return target.getSeq();
}
public void setValue(java.lang.Object object, java.lang.Object value)
throws IllegalStateException, IllegalArgumentException
{
try
{
JGroup target = (JGroup) object;
target.addSeq((java.lang.String) value);
} catch (java.lang.Exception ex)
{
throw new IllegalStateException(ex.toString());
}
}
public void resetValue(Object object) throws IllegalStateException,
IllegalArgumentException
{
try
{
JGroup target = (JGroup) object;
target.removeAllSeq();
} catch (java.lang.Exception ex)
{
throw new IllegalStateException(ex.toString());
}
}
public java.lang.Object newInstance(java.lang.Object parent)
{
return null;
}
};
desc.setHandler(handler);
desc.setNameSpaceURI("www.jalview.org");
desc.setRequired(true);
desc.setMultivalued(true);
addFieldDescriptor(desc);
// -- validation code for: _seqList
fieldValidator = new org.exolab.castor.xml.FieldValidator();
fieldValidator.setMinOccurs(1);
{ // -- local scope
org.exolab.castor.xml.validators.StringValidator typeValidator;
typeValidator = new org.exolab.castor.xml.validators.StringValidator();
fieldValidator.setValidator(typeValidator);
typeValidator.setWhiteSpace("preserve");
}
desc.setValidator(fieldValidator);
// -- _annotationColours
desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
jalview.schemabinding.version2.AnnotationColours.class,
"_annotationColours", "annotationColours",
org.exolab.castor.xml.NodeType.Element);
handler = new org.exolab.castor.xml.XMLFieldHandler()
{
public java.lang.Object getValue(java.lang.Object object)
throws IllegalStateException
{
JGroup target = (JGroup) object;
return target.getAnnotationColours();
}
public void setValue(java.lang.Object object, java.lang.Object value)
throws IllegalStateException, IllegalArgumentException
{
try
{
JGroup target = (JGroup) object;
target.setAnnotationColours((jalview.schemabinding.version2.AnnotationColours) value);
} catch (java.lang.Exception ex)
{
throw new IllegalStateException(ex.toString());
}
}
public java.lang.Object newInstance(java.lang.Object parent)
{
return new jalview.schemabinding.version2.AnnotationColours();
}
};
desc.setHandler(handler);
desc.setNameSpaceURI("www.jalview.org");
desc.setMultivalued(false);
addFieldDescriptor(desc);
// -- validation code for: _annotationColours
fieldValidator = new org.exolab.castor.xml.FieldValidator();
{ // -- local scope
}
desc.setValidator(fieldValidator);
}
// -----------/
// - Methods -/
// -----------/
/**
* Method getAccessMode.
*
* @return the access mode specified for this class.
*/
public org.exolab.castor.mapping.AccessMode getAccessMode()
{
return null;
}
/**
* Method getIdentity.
*
* @return the identity field, null if this class has no identity.
*/
public org.exolab.castor.mapping.FieldDescriptor getIdentity()
{
return super.getIdentity();
}
/**
* Method getJavaClass.
*
* @return the Java class represented by this descriptor.
*/
public java.lang.Class getJavaClass()
{
return jalview.schemabinding.version2.JGroup.class;
}
/**
* Method getNameSpacePrefix.
*
* @return the namespace prefix to use when marshaling as XML.
*/
public java.lang.String getNameSpacePrefix()
{
return _nsPrefix;
}
/**
* Method getNameSpaceURI.
*
* @return the namespace URI used when marshaling and unmarshaling as XML.
*/
public java.lang.String getNameSpaceURI()
{
return _nsURI;
}
/**
* Method getValidator.
*
* @return a specific validator for the class described by this
* ClassDescriptor.
*/
public org.exolab.castor.xml.TypeValidator getValidator()
{
return this;
}
/**
* Method getXMLName.
*
* @return the XML Name for the Class being described.
*/
public java.lang.String getXMLName()
{
return _xmlName;
}
/**
* Method isElementDefinition.
*
* @return true if XML schema definition of this Class is that of a global
* element or element with anonymous type definition.
*/
public boolean isElementDefinition()
{
return _elementDefinition;
}
}