/*******************************************************************************
 * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
 * Copyright (C) 2014 The Jalview Authors
 * 
 * This file is part of Jalview.
 * 
 * Jalview is free software: you can redistribute it and/or
 * modify it under the terms of the GNU General Public License 
 * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
 *  
 * Jalview is distributed in the hope that it will be useful, but 
 * WITHOUT ANY WARRANTY; without even the implied warranty 
 * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
 * PURPOSE.  See the GNU General Public License for more details.
 * 
 * You should have received a copy of the GNU General Public License along with Jalview.  
 * If not, see <http://www.gnu.org/licenses/>.
 * The Jalview Authors are detailed in the 'AUTHORS' file.
 ******************************************************************************/
/*
 * This class was automatically generated with 
 * <a href="http://www.castor.org">Castor 1.1</a>, using an XML
 * Schema.
 * $Id$
 */

package jalview.schemabinding.version2.descriptors;

//---------------------------------/
//- Imported classes and packages -/
//---------------------------------/

import jalview.schemabinding.version2.JSeq;

/**
 * Class JSeqDescriptor.
 * 
 * @version $Revision$ $Date$
 */
public class JSeqDescriptor extends
        org.exolab.castor.xml.util.XMLClassDescriptorImpl
{

  // --------------------------/
  // - Class/Member Variables -/
  // --------------------------/

  /**
   * Field _elementDefinition.
   */
  private boolean _elementDefinition;

  /**
   * Field _nsPrefix.
   */
  private java.lang.String _nsPrefix;

  /**
   * Field _nsURI.
   */
  private java.lang.String _nsURI;

  /**
   * Field _xmlName.
   */
  private java.lang.String _xmlName;

  // ----------------/
  // - Constructors -/
  // ----------------/

  public JSeqDescriptor()
  {
    super();
    _nsURI = "www.jalview.org";
    _xmlName = "JSeq";
    _elementDefinition = true;

    // -- set grouping compositor
    setCompositorAsSequence();
    org.exolab.castor.xml.util.XMLFieldDescriptorImpl desc = null;
    org.exolab.castor.mapping.FieldHandler handler = null;
    org.exolab.castor.xml.FieldValidator fieldValidator = null;
    // -- initialize attribute descriptors

    // -- _colour
    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
            java.lang.Integer.TYPE, "_colour", "colour",
            org.exolab.castor.xml.NodeType.Attribute);
    handler = new org.exolab.castor.xml.XMLFieldHandler()
    {
      public java.lang.Object getValue(java.lang.Object object)
              throws IllegalStateException
      {
        JSeq target = (JSeq) object;
        if (!target.hasColour())
        {
          return null;
        }
        return new java.lang.Integer(target.getColour());
      }

      public void setValue(java.lang.Object object, java.lang.Object value)
              throws IllegalStateException, IllegalArgumentException
      {
        try
        {
          JSeq target = (JSeq) object;
          // if null, use delete method for optional primitives
          if (value == null)
          {
            target.deleteColour();
            return;
          }
          target.setColour(((java.lang.Integer) value).intValue());
        } catch (java.lang.Exception ex)
        {
          throw new IllegalStateException(ex.toString());
        }
      }

      public java.lang.Object newInstance(java.lang.Object parent)
      {
        return null;
      }
    };
    desc.setHandler(handler);
    desc.setMultivalued(false);
    addFieldDescriptor(desc);

    // -- validation code for: _colour
    fieldValidator = new org.exolab.castor.xml.FieldValidator();
    { // -- local scope
      org.exolab.castor.xml.validators.IntValidator typeValidator;
      typeValidator = new org.exolab.castor.xml.validators.IntValidator();
      fieldValidator.setValidator(typeValidator);
      typeValidator.setMinInclusive(-2147483648);
      typeValidator.setMaxInclusive(2147483647);
    }
    desc.setValidator(fieldValidator);
    // -- _start
    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
            java.lang.Integer.TYPE, "_start", "start",
            org.exolab.castor.xml.NodeType.Attribute);
    handler = new org.exolab.castor.xml.XMLFieldHandler()
    {
      public java.lang.Object getValue(java.lang.Object object)
              throws IllegalStateException
      {
        JSeq target = (JSeq) object;
        if (!target.hasStart())
        {
          return null;
        }
        return new java.lang.Integer(target.getStart());
      }

      public void setValue(java.lang.Object object, java.lang.Object value)
              throws IllegalStateException, IllegalArgumentException
      {
        try
        {
          JSeq target = (JSeq) object;
          // ignore null values for non optional primitives
          if (value == null)
          {
            return;
          }

          target.setStart(((java.lang.Integer) value).intValue());
        } catch (java.lang.Exception ex)
        {
          throw new IllegalStateException(ex.toString());
        }
      }

      public java.lang.Object newInstance(java.lang.Object parent)
      {
        return null;
      }
    };
    desc.setHandler(handler);
    desc.setRequired(true);
    desc.setMultivalued(false);
    addFieldDescriptor(desc);

    // -- validation code for: _start
    fieldValidator = new org.exolab.castor.xml.FieldValidator();
    fieldValidator.setMinOccurs(1);
    { // -- local scope
      org.exolab.castor.xml.validators.IntValidator typeValidator;
      typeValidator = new org.exolab.castor.xml.validators.IntValidator();
      fieldValidator.setValidator(typeValidator);
      typeValidator.setMinInclusive(-2147483648);
      typeValidator.setMaxInclusive(2147483647);
    }
    desc.setValidator(fieldValidator);
    // -- _end
    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
            java.lang.Integer.TYPE, "_end", "end",
            org.exolab.castor.xml.NodeType.Attribute);
    handler = new org.exolab.castor.xml.XMLFieldHandler()
    {
      public java.lang.Object getValue(java.lang.Object object)
              throws IllegalStateException
      {
        JSeq target = (JSeq) object;
        if (!target.hasEnd())
        {
          return null;
        }
        return new java.lang.Integer(target.getEnd());
      }

      public void setValue(java.lang.Object object, java.lang.Object value)
              throws IllegalStateException, IllegalArgumentException
      {
        try
        {
          JSeq target = (JSeq) object;
          // ignore null values for non optional primitives
          if (value == null)
          {
            return;
          }

          target.setEnd(((java.lang.Integer) value).intValue());
        } catch (java.lang.Exception ex)
        {
          throw new IllegalStateException(ex.toString());
        }
      }

      public java.lang.Object newInstance(java.lang.Object parent)
      {
        return null;
      }
    };
    desc.setHandler(handler);
    desc.setRequired(true);
    desc.setMultivalued(false);
    addFieldDescriptor(desc);

    // -- validation code for: _end
    fieldValidator = new org.exolab.castor.xml.FieldValidator();
    fieldValidator.setMinOccurs(1);
    { // -- local scope
      org.exolab.castor.xml.validators.IntValidator typeValidator;
      typeValidator = new org.exolab.castor.xml.validators.IntValidator();
      fieldValidator.setValidator(typeValidator);
      typeValidator.setMinInclusive(-2147483648);
      typeValidator.setMaxInclusive(2147483647);
    }
    desc.setValidator(fieldValidator);
    // -- _id
    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
            java.lang.String.class, "_id", "id",
            org.exolab.castor.xml.NodeType.Attribute);
    desc.setImmutable(true);
    handler = new org.exolab.castor.xml.XMLFieldHandler()
    {
      public java.lang.Object getValue(java.lang.Object object)
              throws IllegalStateException
      {
        JSeq target = (JSeq) object;
        return target.getId();
      }

      public void setValue(java.lang.Object object, java.lang.Object value)
              throws IllegalStateException, IllegalArgumentException
      {
        try
        {
          JSeq target = (JSeq) object;
          target.setId((java.lang.String) value);
        } catch (java.lang.Exception ex)
        {
          throw new IllegalStateException(ex.toString());
        }
      }

      public java.lang.Object newInstance(java.lang.Object parent)
      {
        return null;
      }
    };
    desc.setHandler(handler);
    desc.setRequired(true);
    desc.setMultivalued(false);
    addFieldDescriptor(desc);

    // -- validation code for: _id
    fieldValidator = new org.exolab.castor.xml.FieldValidator();
    fieldValidator.setMinOccurs(1);
    { // -- local scope
      org.exolab.castor.xml.validators.StringValidator typeValidator;
      typeValidator = new org.exolab.castor.xml.validators.StringValidator();
      fieldValidator.setValidator(typeValidator);
      typeValidator.setWhiteSpace("preserve");
    }
    desc.setValidator(fieldValidator);
    // -- _hidden
    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
            java.lang.Boolean.TYPE, "_hidden", "hidden",
            org.exolab.castor.xml.NodeType.Attribute);
    handler = new org.exolab.castor.xml.XMLFieldHandler()
    {
      public java.lang.Object getValue(java.lang.Object object)
              throws IllegalStateException
      {
        JSeq target = (JSeq) object;
        if (!target.hasHidden())
        {
          return null;
        }
        return (target.getHidden() ? java.lang.Boolean.TRUE
                : java.lang.Boolean.FALSE);
      }

      public void setValue(java.lang.Object object, java.lang.Object value)
              throws IllegalStateException, IllegalArgumentException
      {
        try
        {
          JSeq target = (JSeq) object;
          // if null, use delete method for optional primitives
          if (value == null)
          {
            target.deleteHidden();
            return;
          }
          target.setHidden(((java.lang.Boolean) value).booleanValue());
        } catch (java.lang.Exception ex)
        {
          throw new IllegalStateException(ex.toString());
        }
      }

      public java.lang.Object newInstance(java.lang.Object parent)
      {
        return null;
      }
    };
    desc.setHandler(handler);
    desc.setMultivalued(false);
    addFieldDescriptor(desc);

    // -- validation code for: _hidden
    fieldValidator = new org.exolab.castor.xml.FieldValidator();
    { // -- local scope
      org.exolab.castor.xml.validators.BooleanValidator typeValidator;
      typeValidator = new org.exolab.castor.xml.validators.BooleanValidator();
      fieldValidator.setValidator(typeValidator);
    }
    desc.setValidator(fieldValidator);
    // -- initialize element descriptors

    // -- _featuresList
    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
            jalview.schemabinding.version2.Features.class, "_featuresList",
            "features", org.exolab.castor.xml.NodeType.Element);
    handler = new org.exolab.castor.xml.XMLFieldHandler()
    {
      public java.lang.Object getValue(java.lang.Object object)
              throws IllegalStateException
      {
        JSeq target = (JSeq) object;
        return target.getFeatures();
      }

      public void setValue(java.lang.Object object, java.lang.Object value)
              throws IllegalStateException, IllegalArgumentException
      {
        try
        {
          JSeq target = (JSeq) object;
          target.addFeatures((jalview.schemabinding.version2.Features) value);
        } catch (java.lang.Exception ex)
        {
          throw new IllegalStateException(ex.toString());
        }
      }

      public void resetValue(Object object) throws IllegalStateException,
              IllegalArgumentException
      {
        try
        {
          JSeq target = (JSeq) object;
          target.removeAllFeatures();
        } catch (java.lang.Exception ex)
        {
          throw new IllegalStateException(ex.toString());
        }
      }

      public java.lang.Object newInstance(java.lang.Object parent)
      {
        return new jalview.schemabinding.version2.Features();
      }
    };
    desc.setHandler(handler);
    desc.setNameSpaceURI("www.jalview.org");
    desc.setMultivalued(true);
    addFieldDescriptor(desc);

    // -- validation code for: _featuresList
    fieldValidator = new org.exolab.castor.xml.FieldValidator();
    fieldValidator.setMinOccurs(0);
    { // -- local scope
    }
    desc.setValidator(fieldValidator);
    // -- _pdbidsList
    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
            jalview.schemabinding.version2.Pdbids.class, "_pdbidsList",
            "pdbids", org.exolab.castor.xml.NodeType.Element);
    handler = new org.exolab.castor.xml.XMLFieldHandler()
    {
      public java.lang.Object getValue(java.lang.Object object)
              throws IllegalStateException
      {
        JSeq target = (JSeq) object;
        return target.getPdbids();
      }

      public void setValue(java.lang.Object object, java.lang.Object value)
              throws IllegalStateException, IllegalArgumentException
      {
        try
        {
          JSeq target = (JSeq) object;
          target.addPdbids((jalview.schemabinding.version2.Pdbids) value);
        } catch (java.lang.Exception ex)
        {
          throw new IllegalStateException(ex.toString());
        }
      }

      public void resetValue(Object object) throws IllegalStateException,
              IllegalArgumentException
      {
        try
        {
          JSeq target = (JSeq) object;
          target.removeAllPdbids();
        } catch (java.lang.Exception ex)
        {
          throw new IllegalStateException(ex.toString());
        }
      }

      public java.lang.Object newInstance(java.lang.Object parent)
      {
        return new jalview.schemabinding.version2.Pdbids();
      }
    };
    desc.setHandler(handler);
    desc.setNameSpaceURI("www.jalview.org");
    desc.setMultivalued(true);
    addFieldDescriptor(desc);

    // -- validation code for: _pdbidsList
    fieldValidator = new org.exolab.castor.xml.FieldValidator();
    fieldValidator.setMinOccurs(0);
    { // -- local scope
    }
    desc.setValidator(fieldValidator);
    // -- _hiddenSequencesList
    desc = new org.exolab.castor.xml.util.XMLFieldDescriptorImpl(
            java.lang.Integer.TYPE, "_hiddenSequencesList",
            "hiddenSequences", org.exolab.castor.xml.NodeType.Element);
    handler = new org.exolab.castor.xml.XMLFieldHandler()
    {
      public java.lang.Object getValue(java.lang.Object object)
              throws IllegalStateException
      {
        JSeq target = (JSeq) object;
        return target.getHiddenSequences();
      }

      public void setValue(java.lang.Object object, java.lang.Object value)
              throws IllegalStateException, IllegalArgumentException
      {
        try
        {
          JSeq target = (JSeq) object;
          // ignore null values for non optional primitives
          if (value == null)
          {
            return;
          }

          target.addHiddenSequences(((java.lang.Integer) value).intValue());
        } catch (java.lang.Exception ex)
        {
          throw new IllegalStateException(ex.toString());
        }
      }

      public void resetValue(Object object) throws IllegalStateException,
              IllegalArgumentException
      {
        try
        {
          JSeq target = (JSeq) object;
          target.removeAllHiddenSequences();
        } catch (java.lang.Exception ex)
        {
          throw new IllegalStateException(ex.toString());
        }
      }

      public java.lang.Object newInstance(java.lang.Object parent)
      {
        return null;
      }
    };
    desc.setHandler(handler);
    desc.setNameSpaceURI("www.jalview.org");
    desc.setMultivalued(true);
    addFieldDescriptor(desc);

    // -- validation code for: _hiddenSequencesList
    fieldValidator = new org.exolab.castor.xml.FieldValidator();
    fieldValidator.setMinOccurs(0);
    { // -- local scope
      org.exolab.castor.xml.validators.IntValidator typeValidator;
      typeValidator = new org.exolab.castor.xml.validators.IntValidator();
      fieldValidator.setValidator(typeValidator);
      typeValidator.setMinInclusive(-2147483648);
      typeValidator.setMaxInclusive(2147483647);
    }
    desc.setValidator(fieldValidator);
  }

  // -----------/
  // - Methods -/
  // -----------/

  /**
   * Method getAccessMode.
   * 
   * @return the access mode specified for this class.
   */
  public org.exolab.castor.mapping.AccessMode getAccessMode()
  {
    return null;
  }

  /**
   * Method getIdentity.
   * 
   * @return the identity field, null if this class has no identity.
   */
  public org.exolab.castor.mapping.FieldDescriptor getIdentity()
  {
    return super.getIdentity();
  }

  /**
   * Method getJavaClass.
   * 
   * @return the Java class represented by this descriptor.
   */
  public java.lang.Class getJavaClass()
  {
    return jalview.schemabinding.version2.JSeq.class;
  }

  /**
   * Method getNameSpacePrefix.
   * 
   * @return the namespace prefix to use when marshaling as XML.
   */
  public java.lang.String getNameSpacePrefix()
  {
    return _nsPrefix;
  }

  /**
   * Method getNameSpaceURI.
   * 
   * @return the namespace URI used when marshaling and unmarshaling as XML.
   */
  public java.lang.String getNameSpaceURI()
  {
    return _nsURI;
  }

  /**
   * Method getValidator.
   * 
   * @return a specific validator for the class described by this
   *         ClassDescriptor.
   */
  public org.exolab.castor.xml.TypeValidator getValidator()
  {
    return this;
  }

  /**
   * Method getXMLName.
   * 
   * @return the XML Name for the Class being described.
   */
  public java.lang.String getXMLName()
  {
    return _xmlName;
  }

  /**
   * Method isElementDefinition.
   * 
   * @return true if XML schema definition of this Class is that of a global
   *         element or element with anonymous type definition.
   */
  public boolean isElementDefinition()
  {
    return _elementDefinition;
  }

}