/*
* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
* Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
* Jalview is free software: you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation, either version 3
* of the License, or (at your option) any later version.
*
* Jalview is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty
* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
* PURPOSE. See the GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with Jalview. If not, see .
* The Jalview Authors are detailed in the 'AUTHORS' file.
*/
package jalview.util;
import java.util.HashMap;
import java.util.Map;
/**
* A class to hold constants relating to Url links used in Jalview
*/
public class Constants
{
//character used to represent secondary structures
public static final char HELIX = 'H';
public static final char SHEET = 'E';
public static final char COIL = 'C';
//label in secondary structure annotation data model from 3d structures
public static final String SS_ANNOTATION_LABEL = "Secondary Structure";
//label in secondary structure annotation data model from JPred
public static final String SS_ANNOTATION_FROM_JPRED_LABEL = "jnetpred";
public static final Map SECONDARY_STRUCTURE_LABELS = new HashMap<>();
static {
SECONDARY_STRUCTURE_LABELS.put(SS_ANNOTATION_LABEL, "3D Structures");
SECONDARY_STRUCTURE_LABELS.put(SS_ANNOTATION_FROM_JPRED_LABEL, "JPred");
// Add other secondary structure labels here if needed
}
}