/** * */ package jalview.ws.dbsources; import jalview.ws.seqfetcher.DbSourceProxy; /** * flyweight class specifying retrieval of Full family alignments from PFAM * */ public class PfamFull extends Pfam implements DbSourceProxy { public PfamFull() { super(); } /* (non-Javadoc) * @see jalview.ws.dbsources.Pfam#getPFAMURL() */ protected String getPFAMURL() { return "http://pfam.sanger.ac.uk/family/alignment/download/format?alnType=full&format=stockholm&order=t&case=l&gaps=default&entry="; } /* (non-Javadoc) * @see jalview.ws.seqfetcher.DbSourceProxy#getDbName() */ public String getDbName() { return "PFAM (Full)"; } public String getDbSource() { return getDbName(); // so we have unique DbSource string. } public String getTestQuery() { return "PF00535"; // TODO: Pick a better full alignment to retrieve. } }