/** * */ package jalview.ws.dbsources; import jalview.ws.seqfetcher.DbSourceProxy; /** * flyweight class specifying retrieval of Seed alignments from PFAM * @author JimP * */ public class PfamSeed extends Pfam implements DbSourceProxy { public PfamSeed() { super(); } /* (non-Javadoc) * @see jalview.ws.dbsources.Pfam#getPFAMURL() */ protected String getPFAMURL() { return "http://pfam.sanger.ac.uk/family/alignment/download/format?alnType=seed&format=stockholm&order=t&case=l&gaps=default&entry="; } /* (non-Javadoc) * @see jalview.ws.seqfetcher.DbSourceProxy#getDbName() */ public String getDbName() { return "PFAM (Seed)"; } public String getDbSource() { return jalview.datamodel.DBRefSource.PFAM; // archetype source } public String getTestQuery() { return "PF00535"; } }