/*
* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
* Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
* Jalview is free software: you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation, either version 3
* of the License, or (at your option) any later version.
*
* Jalview is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty
* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
* PURPOSE. See the GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with Jalview. If not, see .
* The Jalview Authors are detailed in the 'AUTHORS' file.
*/
package jalview.ws.jws2;
import jalview.util.MessageManager;
import jalview.ws.jws2.jabaws2.Jws2Instance;
import jalview.ws.params.ArgumentI;
import jalview.ws.params.WsParamSetI;
import java.util.List;
import compbio.metadata.Preset;
public class JabaPreset implements WsParamSetI
{
Preset p = null;
Jws2Instance service;
public JabaPreset(Jws2Instance svc, Preset preset)
{
service = svc;
p = preset;
}
@Override
public String getName()
{
return p.getName();
}
@Override
public String getDescription()
{
return p.getDescription();
}
@Override
public String[] getApplicableUrls()
{
return new String[] { service.getUri() };
}
@Override
public String getSourceFile()
{
return null;
}
@Override
public boolean isModifiable()
{
return false;
}
@Override
public void setSourceFile(String newfile)
{
throw new Error(MessageManager
.formatMessage("error.cannot_set_source_file_for", new String[]
{ getClass().toString() }));
}
@Override
public List getArguments()
{
try
{
return JabaParamStore.getJwsArgsfromJaba(
p.getArguments(service.getRunnerConfig()));
} catch (Exception e)
{
e.printStackTrace();
throw new Error(MessageManager
.getString("error.mismatch_service_instance_preset"));
}
}
@Override
public void setArguments(List args)
{
throw new Error(MessageManager
.getString("error.cannot_set_params_for_ws_preset"));
}
public Preset getJabaPreset()
{
return p;
}
}