/*
* Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
* Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle
*
* This file is part of Jalview.
*
* Jalview is free software: you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
*
* Jalview is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty
* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
* PURPOSE. See the GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License along with Jalview. If not, see .
*/
package jalview.ws.jws2;
import jalview.ws.jws2.jabaws2.Jws2Instance;
import jalview.ws.params.ArgumentI;
import jalview.ws.params.WsParamSetI;
import java.util.List;
import compbio.metadata.Preset;
public class JabaPreset implements WsParamSetI
{
Preset p = null;
Jws2Instance service;
public JabaPreset(Jws2Instance svc, Preset preset)
{
service = svc;
p = preset;
}
@Override
public String getName()
{
return p.getName();
}
@Override
public String getDescription()
{
return p.getDescription();
}
@Override
public String[] getApplicableUrls()
{
return new String[]
{ service.getUri() };
}
@Override
public String getSourceFile()
{
return null;
}
@Override
public boolean isModifiable()
{
return false;
}
@Override
public void setSourceFile(String newfile)
{
throw new Error("Cannot set source file for " + getClass());
}
@Override
public List getArguments()
{
try
{
return JabaParamStore.getJwsArgsfromJaba(p.getArguments(service
.getRunnerConfig()));
} catch (Exception e)
{
e.printStackTrace();
throw new Error(
"Probable mismatch between service instance and preset!");
}
}
@Override
public void setArguments(List args)
{
throw new Error("Cannot set Parameters for a Jaba Web service's preset");
}
}