/*
* Jalview - A Sequence Alignment Editor and Viewer (Version 2.8)
* Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle
*
* This file is part of Jalview.
*
* Jalview is free software: you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
*
* Jalview is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty
* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
* PURPOSE. See the GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License along with Jalview. If not, see .
*/
package jalview.ws.rest.params;
import jalview.ws.params.OptionI;
import jalview.ws.rest.InputType;
import jalview.ws.rest.RestJob;
import java.io.UnsupportedEncodingException;
import java.util.ArrayList;
import java.util.List;
import org.apache.http.entity.mime.content.ContentBody;
/**
* format a tree for input to a rest service
*
* @author JimP
*
*/
public class Tree extends InputType
{
public Tree()
{
super(new Class[]
{ jalview.analysis.NJTree.class });
}
// TODO specify modifiers for tree output format
@Override
public ContentBody formatForInput(RestJob rj)
throws UnsupportedEncodingException
{
// TODO: implement tree inputType
/*
* rj.getTreeForInput(token); return new StringBody(new )
*/
throw new Error("Tree InputType not yet implemented");
// return null;
}
public String getURLtokenPrefix()
{
return "NEWICK";
}
@Override
public List getURLEncodedParameter()
{
ArrayList prms = new ArrayList();
super.addBaseParams(prms);
return prms;
}
@Override
public boolean configureProperty(String tok, String val,
StringBuffer warnings)
{
return true;
}
@Override
public List getOptions()
{
return getBaseOptions();
}
}