An ObjectFactory allows you to programatically
* construct new instances of the Java representation
* for XML content. The Java representation of XML
* content can consist of schema derived interfaces
* and classes representing the binding of schema
* type definitions, element declarations and model
* groups. Factory methods for each of these are
* provided in this class.
*
*/
@XmlRegistry
public class ObjectFactory {
private final static QName _WebServiceParameterSet_QNAME = new QName("www.jalview.org/xml/wsparamset", "WebServiceParameterSet");
private final static QName _JalviewModel_QNAME = new QName("www.jalview.org", "JalviewModel");
private final static QName _JalviewUserColours_QNAME = new QName("www.jalview.org/colours", "JalviewUserColours");
/**
* Create a new ObjectFactory that can be used to create new instances of schema derived classes for package: jalview.xml.binding.jalview
*
*/
public ObjectFactory() {
}
/**
* Create an instance of {@link AlcodonFrame }
*
*/
public AlcodonFrame createAlcodonFrame() {
return new AlcodonFrame();
}
/**
* Create an instance of {@link MapListType }
*
*/
public MapListType createMapListType() {
return new MapListType();
}
/**
* Create an instance of {@link Sequence }
*
*/
public Sequence createSequence() {
return new Sequence();
}
/**
* Create an instance of {@link Annotation }
*
*/
public Annotation createAnnotation() {
return new Annotation();
}
/**
* Create an instance of {@link SequenceSet }
*
*/
public SequenceSet createSequenceSet() {
return new SequenceSet();
}
/**
* Create an instance of {@link FeatureMatcherSet }
*
*/
public FeatureMatcherSet createFeatureMatcherSet() {
return new FeatureMatcherSet();
}
/**
* Create an instance of {@link JalviewUserColours }
*
*/
public JalviewUserColours createJalviewUserColours() {
return new JalviewUserColours();
}
/**
* Create an instance of {@link Pdbentry }
*
*/
public Pdbentry createPdbentry() {
return new Pdbentry();
}
/**
* Create an instance of {@link Feature }
*
*/
public Feature createFeature() {
return new Feature();
}
/**
* Create an instance of {@link JalviewModel }
*
*/
public JalviewModel createJalviewModel() {
return new JalviewModel();
}
/**
* Create an instance of {@link JalviewModel.FeatureSettings }
*
*/
public JalviewModel.FeatureSettings createJalviewModelFeatureSettings() {
return new JalviewModel.FeatureSettings();
}
/**
* Create an instance of {@link JalviewModel.PcaViewer }
*
*/
public JalviewModel.PcaViewer createJalviewModelPcaViewer() {
return new JalviewModel.PcaViewer();
}
/**
* Create an instance of {@link JalviewModel.Viewport }
*
*/
public JalviewModel.Viewport createJalviewModelViewport() {
return new JalviewModel.Viewport();
}
/**
* Create an instance of {@link JalviewModel.JSeq }
*
*/
public JalviewModel.JSeq createJalviewModelJSeq() {
return new JalviewModel.JSeq();
}
/**
* Create an instance of {@link JalviewModel.JSeq.RnaViewer }
*
*/
public JalviewModel.JSeq.RnaViewer createJalviewModelJSeqRnaViewer() {
return new JalviewModel.JSeq.RnaViewer();
}
/**
* Create an instance of {@link JalviewModel.JSeq.Pdbids }
*
*/
public JalviewModel.JSeq.Pdbids createJalviewModelJSeqPdbids() {
return new JalviewModel.JSeq.Pdbids();
}
/**
* Create an instance of {@link DoubleMatrix }
*
*/
public DoubleMatrix createDoubleMatrix() {
return new DoubleMatrix();
}
/**
* Create an instance of {@link AnnotationColourScheme }
*
*/
public AnnotationColourScheme createAnnotationColourScheme() {
return new AnnotationColourScheme();
}
/**
* Create an instance of {@link PcaDataType }
*
*/
public PcaDataType createPcaDataType() {
return new PcaDataType();
}
/**
* Create an instance of {@link DoubleVector }
*
*/
public DoubleVector createDoubleVector() {
return new DoubleVector();
}
/**
* Create an instance of {@link AlcodonFrame.Alcodon }
*
*/
public AlcodonFrame.Alcodon createAlcodonFrameAlcodon() {
return new AlcodonFrame.Alcodon();
}
/**
* Create an instance of {@link AlcodonFrame.AlcodMap }
*
*/
public AlcodonFrame.AlcodMap createAlcodonFrameAlcodMap() {
return new AlcodonFrame.AlcodMap();
}
/**
* Create an instance of {@link AnnotationElement }
*
*/
public AnnotationElement createAnnotationElement() {
return new AnnotationElement();
}
/**
* Create an instance of {@link Mapping }
*
*/
public Mapping createMapping() {
return new Mapping();
}
/**
* Create an instance of {@link MapListType.MapListFrom }
*
*/
public MapListType.MapListFrom createMapListTypeMapListFrom() {
return new MapListType.MapListFrom();
}
/**
* Create an instance of {@link MapListType.MapListTo }
*
*/
public MapListType.MapListTo createMapListTypeMapListTo() {
return new MapListType.MapListTo();
}
/**
* Create an instance of {@link SequenceType }
*
*/
public SequenceType createSequenceType() {
return new SequenceType();
}
/**
* Create an instance of {@link Sequence.DBRef }
*
*/
public Sequence.DBRef createSequenceDBRef() {
return new Sequence.DBRef();
}
/**
* Create an instance of {@link Annotation.ThresholdLine }
*
*/
public Annotation.ThresholdLine createAnnotationThresholdLine() {
return new Annotation.ThresholdLine();
}
/**
* Create an instance of {@link Annotation.Property }
*
*/
public Annotation.Property createAnnotationProperty() {
return new Annotation.Property();
}
/**
* Create an instance of {@link SequenceSet.SequenceSetProperties }
*
*/
public SequenceSet.SequenceSetProperties createSequenceSetSequenceSetProperties() {
return new SequenceSet.SequenceSetProperties();
}
/**
* Create an instance of {@link VAMSAS }
*
*/
public VAMSAS createVAMSAS() {
return new VAMSAS();
}
/**
* Create an instance of {@link FeatureMatcher }
*
*/
public FeatureMatcher createFeatureMatcher() {
return new FeatureMatcher();
}
/**
* Create an instance of {@link WebServiceParameterSet }
*
*/
public WebServiceParameterSet createWebServiceParameterSet() {
return new WebServiceParameterSet();
}
/**
* Create an instance of {@link FeatureMatcherSet.CompoundMatcher }
*
*/
public FeatureMatcherSet.CompoundMatcher createFeatureMatcherSetCompoundMatcher() {
return new FeatureMatcherSet.CompoundMatcher();
}
/**
* Create an instance of {@link JalviewUserColours.Colour }
*
*/
public JalviewUserColours.Colour createJalviewUserColoursColour() {
return new JalviewUserColours.Colour();
}
/**
* Create an instance of {@link JalviewUserColours.Filter }
*
*/
public JalviewUserColours.Filter createJalviewUserColoursFilter() {
return new JalviewUserColours.Filter();
}
/**
* Create an instance of {@link Pdbentry.Property }
*
*/
public Pdbentry.Property createPdbentryProperty() {
return new Pdbentry.Property();
}
/**
* Create an instance of {@link Feature.OtherData }
*
*/
public Feature.OtherData createFeatureOtherData() {
return new Feature.OtherData();
}
/**
* Create an instance of {@link JalviewModel.JGroup }
*
*/
public JalviewModel.JGroup createJalviewModelJGroup() {
return new JalviewModel.JGroup();
}
/**
* Create an instance of {@link JalviewModel.UserColours }
*
*/
public JalviewModel.UserColours createJalviewModelUserColours() {
return new JalviewModel.UserColours();
}
/**
* Create an instance of {@link JalviewModel.Tree }
*
*/
public JalviewModel.Tree createJalviewModelTree() {
return new JalviewModel.Tree();
}
/**
* Create an instance of {@link JalviewModel.FeatureSettings.Setting }
*
*/
public JalviewModel.FeatureSettings.Setting createJalviewModelFeatureSettingsSetting() {
return new JalviewModel.FeatureSettings.Setting();
}
/**
* Create an instance of {@link JalviewModel.FeatureSettings.Group }
*
*/
public JalviewModel.FeatureSettings.Group createJalviewModelFeatureSettingsGroup() {
return new JalviewModel.FeatureSettings.Group();
}
/**
* Create an instance of {@link JalviewModel.PcaViewer.SequencePoint }
*
*/
public JalviewModel.PcaViewer.SequencePoint createJalviewModelPcaViewerSequencePoint() {
return new JalviewModel.PcaViewer.SequencePoint();
}
/**
* Create an instance of {@link JalviewModel.PcaViewer.Axis }
*
*/
public JalviewModel.PcaViewer.Axis createJalviewModelPcaViewerAxis() {
return new JalviewModel.PcaViewer.Axis();
}
/**
* Create an instance of {@link JalviewModel.PcaViewer.SeqPointMin }
*
*/
public JalviewModel.PcaViewer.SeqPointMin createJalviewModelPcaViewerSeqPointMin() {
return new JalviewModel.PcaViewer.SeqPointMin();
}
/**
* Create an instance of {@link JalviewModel.PcaViewer.SeqPointMax }
*
*/
public JalviewModel.PcaViewer.SeqPointMax createJalviewModelPcaViewerSeqPointMax() {
return new JalviewModel.PcaViewer.SeqPointMax();
}
/**
* Create an instance of {@link JalviewModel.Viewport.HiddenColumns }
*
*/
public JalviewModel.Viewport.HiddenColumns createJalviewModelViewportHiddenColumns() {
return new JalviewModel.Viewport.HiddenColumns();
}
/**
* Create an instance of {@link JalviewModel.Viewport.CalcIdParam }
*
*/
public JalviewModel.Viewport.CalcIdParam createJalviewModelViewportCalcIdParam() {
return new JalviewModel.Viewport.CalcIdParam();
}
/**
* Create an instance of {@link JalviewModel.JSeq.RnaViewer.SecondaryStructure }
*
*/
public JalviewModel.JSeq.RnaViewer.SecondaryStructure createJalviewModelJSeqRnaViewerSecondaryStructure() {
return new JalviewModel.JSeq.RnaViewer.SecondaryStructure();
}
/**
* Create an instance of {@link JalviewModel.JSeq.Pdbids.StructureState }
*
*/
public JalviewModel.JSeq.Pdbids.StructureState createJalviewModelJSeqPdbidsStructureState() {
return new JalviewModel.JSeq.Pdbids.StructureState();
}
/**
* Create an instance of {@link JAXBElement }{@code <}{@link WebServiceParameterSet }{@code >}}
*
*/
@XmlElementDecl(namespace = "www.jalview.org/xml/wsparamset", name = "WebServiceParameterSet")
public JAXBElement