// // This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802 // See http://java.sun.com/xml/jaxb // Any modifications to this file will be lost upon recompilation of the source schema. // Generated on: 2023.02.22 at 05:27:56 PM GMT // package jalview.xml.binding.uniprot; import java.util.ArrayList; import java.util.List; import javax.xml.bind.annotation.XmlAccessType; import javax.xml.bind.annotation.XmlAccessorType; import javax.xml.bind.annotation.XmlElement; import javax.xml.bind.annotation.XmlType; /** * Describes the names for the protein and parts thereof. * Equivalent to the flat file DE-line. * *
Java class for proteinType complex type. * *
The following schema fragment specifies the expected content contained within this class. * *
* <complexType name="proteinType"> * <complexContent> * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> * <sequence> * <group ref="{http://uniprot.org/uniprot}proteinNameGroup"/> * <element name="domain" maxOccurs="unbounded" minOccurs="0"> * <complexType> * <complexContent> * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> * <group ref="{http://uniprot.org/uniprot}proteinNameGroup"/> * </restriction> * </complexContent> * </complexType> * </element> * <element name="component" maxOccurs="unbounded" minOccurs="0"> * <complexType> * <complexContent> * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> * <group ref="{http://uniprot.org/uniprot}proteinNameGroup"/> * </restriction> * </complexContent> * </complexType> * </element> * </sequence> * </restriction> * </complexContent> * </complexType> ** * */ @XmlAccessorType(XmlAccessType.FIELD) @XmlType(name = "proteinType", propOrder = { "recommendedName", "alternativeName", "submittedName", "allergenName", "biotechName", "cdAntigenName", "innName", "domain", "component" }) public class ProteinType { protected ProteinType.RecommendedName recommendedName; protected List
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
* This is why there is not a set
method for the alternativeName property.
*
*
* For example, to add a new item, do as follows: *
* getAlternativeName().add(newItem); ** * *
* Objects of the following type(s) are allowed in the list
* {@link ProteinType.AlternativeName }
*
*
*/
public List
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
* This is why there is not a
* For example, to add a new item, do as follows:
*
* Objects of the following type(s) are allowed in the list
* {@link ProteinType.SubmittedName }
*
*
*/
public List
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
* This is why there is not a
* For example, to add a new item, do as follows:
*
* Objects of the following type(s) are allowed in the list
* {@link EvidencedStringType }
*
*
*/
public List
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
* This is why there is not a
* For example, to add a new item, do as follows:
*
* Objects of the following type(s) are allowed in the list
* {@link EvidencedStringType }
*
*
*/
public List
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
* This is why there is not a
* For example, to add a new item, do as follows:
*
* Objects of the following type(s) are allowed in the list
* {@link ProteinType.Domain }
*
*
*/
public List
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
* This is why there is not a
* For example, to add a new item, do as follows:
*
* Objects of the following type(s) are allowed in the list
* {@link ProteinType.Component }
*
*
*/
public List Java class for anonymous complex type.
*
* The following schema fragment specifies the expected content contained within this class.
*
*
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
* This is why there is not a
* For example, to add a new item, do as follows:
*
* Objects of the following type(s) are allowed in the list
* {@link EvidencedStringType }
*
*
*/
public List
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
* This is why there is not a
* For example, to add a new item, do as follows:
*
* Objects of the following type(s) are allowed in the list
* {@link EvidencedStringType }
*
*
*/
public List Java class for anonymous complex type.
*
* The following schema fragment specifies the expected content contained within this class.
*
*
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
* This is why there is not a
* For example, to add a new item, do as follows:
*
* Objects of the following type(s) are allowed in the list
* {@link ProteinType.AlternativeName }
*
*
*/
public List
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
* This is why there is not a
* For example, to add a new item, do as follows:
*
* Objects of the following type(s) are allowed in the list
* {@link ProteinType.SubmittedName }
*
*
*/
public List
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
* This is why there is not a
* For example, to add a new item, do as follows:
*
* Objects of the following type(s) are allowed in the list
* {@link EvidencedStringType }
*
*
*/
public List
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
* This is why there is not a
* For example, to add a new item, do as follows:
*
* Objects of the following type(s) are allowed in the list
* {@link EvidencedStringType }
*
*
*/
public List Java class for anonymous complex type.
*
* The following schema fragment specifies the expected content contained within this class.
*
*
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
* This is why there is not a
* For example, to add a new item, do as follows:
*
* Objects of the following type(s) are allowed in the list
* {@link ProteinType.AlternativeName }
*
*
*/
public List
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
* This is why there is not a
* For example, to add a new item, do as follows:
*
* Objects of the following type(s) are allowed in the list
* {@link ProteinType.SubmittedName }
*
*
*/
public List
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
* This is why there is not a
* For example, to add a new item, do as follows:
*
* Objects of the following type(s) are allowed in the list
* {@link EvidencedStringType }
*
*
*/
public List
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
* This is why there is not a
* For example, to add a new item, do as follows:
*
* Objects of the following type(s) are allowed in the list
* {@link EvidencedStringType }
*
*
*/
public List Java class for anonymous complex type.
*
* The following schema fragment specifies the expected content contained within this class.
*
*
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
* This is why there is not a
* For example, to add a new item, do as follows:
*
* Objects of the following type(s) are allowed in the list
* {@link EvidencedStringType }
*
*
*/
public List
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
* This is why there is not a
* For example, to add a new item, do as follows:
*
* Objects of the following type(s) are allowed in the list
* {@link EvidencedStringType }
*
*
*/
public List Java class for anonymous complex type.
*
* The following schema fragment specifies the expected content contained within this class.
*
*
* This accessor method returns a reference to the live list,
* not a snapshot. Therefore any modification you make to the
* returned list will be present inside the JAXB object.
* This is why there is not a
* For example, to add a new item, do as follows:
*
* Objects of the following type(s) are allowed in the list
* {@link EvidencedStringType }
*
*
*/
public Listset
method for the submittedName property.
*
*
* getSubmittedName().add(newItem);
*
*
*
* set
method for the cdAntigenName property.
*
*
* getCdAntigenName().add(newItem);
*
*
*
* set
method for the innName property.
*
*
* getInnName().add(newItem);
*
*
*
* set
method for the domain property.
*
*
* getDomain().add(newItem);
*
*
*
* set
method for the component property.
*
*
* getComponent().add(newItem);
*
*
*
*
* <complexType>
* <complexContent>
* <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
* <sequence>
* <element name="fullName" type="{http://uniprot.org/uniprot}evidencedStringType" minOccurs="0"/>
* <element name="shortName" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/>
* <element name="ecNumber" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/>
* </sequence>
* </restriction>
* </complexContent>
* </complexType>
*
*
*
*/
@XmlAccessorType(XmlAccessType.FIELD)
@XmlType(name = "", propOrder = {
"fullName",
"shortName",
"ecNumber"
})
public static class AlternativeName {
protected EvidencedStringType fullName;
protected Listset
method for the shortName property.
*
*
* getShortName().add(newItem);
*
*
*
* set
method for the ecNumber property.
*
*
* getEcNumber().add(newItem);
*
*
*
*
* <complexType>
* <complexContent>
* <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
* <group ref="{http://uniprot.org/uniprot}proteinNameGroup"/>
* </restriction>
* </complexContent>
* </complexType>
*
*
*
*/
@XmlAccessorType(XmlAccessType.FIELD)
@XmlType(name = "", propOrder = {
"recommendedName",
"alternativeName",
"submittedName",
"allergenName",
"biotechName",
"cdAntigenName",
"innName"
})
public static class Component {
protected ProteinType.RecommendedName recommendedName;
protected Listset
method for the alternativeName property.
*
*
* getAlternativeName().add(newItem);
*
*
*
* set
method for the submittedName property.
*
*
* getSubmittedName().add(newItem);
*
*
*
* set
method for the cdAntigenName property.
*
*
* getCdAntigenName().add(newItem);
*
*
*
* set
method for the innName property.
*
*
* getInnName().add(newItem);
*
*
*
*
* <complexType>
* <complexContent>
* <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
* <group ref="{http://uniprot.org/uniprot}proteinNameGroup"/>
* </restriction>
* </complexContent>
* </complexType>
*
*
*
*/
@XmlAccessorType(XmlAccessType.FIELD)
@XmlType(name = "", propOrder = {
"recommendedName",
"alternativeName",
"submittedName",
"allergenName",
"biotechName",
"cdAntigenName",
"innName"
})
public static class Domain {
protected ProteinType.RecommendedName recommendedName;
protected Listset
method for the alternativeName property.
*
*
* getAlternativeName().add(newItem);
*
*
*
* set
method for the submittedName property.
*
*
* getSubmittedName().add(newItem);
*
*
*
* set
method for the cdAntigenName property.
*
*
* getCdAntigenName().add(newItem);
*
*
*
* set
method for the innName property.
*
*
* getInnName().add(newItem);
*
*
*
*
* <complexType>
* <complexContent>
* <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
* <sequence>
* <element name="fullName" type="{http://uniprot.org/uniprot}evidencedStringType"/>
* <element name="shortName" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/>
* <element name="ecNumber" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/>
* </sequence>
* </restriction>
* </complexContent>
* </complexType>
*
*
*
*/
@XmlAccessorType(XmlAccessType.FIELD)
@XmlType(name = "", propOrder = {
"fullName",
"shortName",
"ecNumber"
})
public static class RecommendedName {
@XmlElement(required = true)
protected EvidencedStringType fullName;
protected Listset
method for the shortName property.
*
*
* getShortName().add(newItem);
*
*
*
* set
method for the ecNumber property.
*
*
* getEcNumber().add(newItem);
*
*
*
*
* <complexType>
* <complexContent>
* <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
* <sequence>
* <element name="fullName" type="{http://uniprot.org/uniprot}evidencedStringType"/>
* <element name="ecNumber" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/>
* </sequence>
* </restriction>
* </complexContent>
* </complexType>
*
*
*
*/
@XmlAccessorType(XmlAccessType.FIELD)
@XmlType(name = "", propOrder = {
"fullName",
"ecNumber"
})
public static class SubmittedName {
@XmlElement(required = true)
protected EvidencedStringType fullName;
protected Listset
method for the ecNumber property.
*
*
* getEcNumber().add(newItem);
*
*
*
*