/*
 * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4.0.b2)
 * Copyright (C) 2009 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
 * 
 * This program is free software; you can redistribute it and/or
 * modify it under the terms of the GNU General Public License
 * as published by the Free Software Foundation; either version 2
 * of the License, or (at your option) any later version.
 * 
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU General Public License for more details.
 * 
 * You should have received a copy of the GNU General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA
 */
package uk.ac.ebi.www.picr.AccessionMappingService;

public interface AccessionMapperInterface extends java.rmi.Remote
{
  public uk.ac.ebi.picr.model.UPEntry getUPIForSequence(
          java.lang.String sequence, java.lang.String[] searchDatabases,
          java.lang.String taxonId, boolean onlyActive)
          throws java.rmi.RemoteException;

  public uk.ac.ebi.picr.model.UPEntry[] getUPIForAccession(
          java.lang.String accession, java.lang.String ac_version,
          java.lang.String[] searchDatabases, java.lang.String taxonId,
          boolean onlyActive) throws java.rmi.RemoteException;

  public java.lang.String[] getMappedDatabaseNames()
          throws java.rmi.RemoteException;
}