/**
 * Alignment.java
 *
 * This file was auto-generated from WSDL
 * by the Apache Axis 1.2RC2 Nov 16, 2004 (12:19:44 EST) WSDL2Java emitter.
 */

package vamsas.objects.simple;

public class Alignment  extends vamsas.objects.simple.Object  implements java.io.Serializable {
    private java.lang.String gapchar;
    private java.lang.String[] method;
    private vamsas.objects.simple.SequenceSet seqs;

    public Alignment() {
    }

    public Alignment(
           java.lang.String gapchar,
           java.lang.String[] method,
           vamsas.objects.simple.SequenceSet seqs) {
           this.gapchar = gapchar;
           this.method = method;
           this.seqs = seqs;
    }


    /**
     * Gets the gapchar value for this Alignment.
     * 
     * @return gapchar
     */
    public java.lang.String getGapchar() {
        return gapchar;
    }


    /**
     * Sets the gapchar value for this Alignment.
     * 
     * @param gapchar
     */
    public void setGapchar(java.lang.String gapchar) {
        this.gapchar = gapchar;
    }


    /**
     * Gets the method value for this Alignment.
     * 
     * @return method
     */
    public java.lang.String[] getMethod() {
        return method;
    }


    /**
     * Sets the method value for this Alignment.
     * 
     * @param method
     */
    public void setMethod(java.lang.String[] method) {
        this.method = method;
    }


    /**
     * Gets the seqs value for this Alignment.
     * 
     * @return seqs
     */
    public vamsas.objects.simple.SequenceSet getSeqs() {
        return seqs;
    }


    /**
     * Sets the seqs value for this Alignment.
     * 
     * @param seqs
     */
    public void setSeqs(vamsas.objects.simple.SequenceSet seqs) {
        this.seqs = seqs;
    }

    private java.lang.Object __equalsCalc = null;
    public synchronized boolean equals(java.lang.Object obj) {
        if (!(obj instanceof Alignment)) return false;
        Alignment other = (Alignment) obj;
        if (obj == null) return false;
        if (this == obj) return true;
        if (__equalsCalc != null) {
            return (__equalsCalc == obj);
        }
        __equalsCalc = obj;
        boolean _equals;
        _equals = super.equals(obj) && 
            ((this.gapchar==null && other.getGapchar()==null) || 
             (this.gapchar!=null &&
              this.gapchar.equals(other.getGapchar()))) &&
            ((this.method==null && other.getMethod()==null) || 
             (this.method!=null &&
              java.util.Arrays.equals(this.method, other.getMethod()))) &&
            ((this.seqs==null && other.getSeqs()==null) || 
             (this.seqs!=null &&
              this.seqs.equals(other.getSeqs())));
        __equalsCalc = null;
        return _equals;
    }

    private boolean __hashCodeCalc = false;
    public synchronized int hashCode() {
        if (__hashCodeCalc) {
            return 0;
        }
        __hashCodeCalc = true;
        int _hashCode = super.hashCode();
        if (getGapchar() != null) {
            _hashCode += getGapchar().hashCode();
        }
        if (getMethod() != null) {
            for (int i=0;
                 i<java.lang.reflect.Array.getLength(getMethod());
                 i++) {
                java.lang.Object obj = java.lang.reflect.Array.get(getMethod(), i);
                if (obj != null &&
                    !obj.getClass().isArray()) {
                    _hashCode += obj.hashCode();
                }
            }
        }
        if (getSeqs() != null) {
            _hashCode += getSeqs().hashCode();
        }
        __hashCodeCalc = false;
        return _hashCode;
    }

}