/*
* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
* Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
* Jalview is free software: you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation, either version 3
* of the License, or (at your option) any later version.
*
* Jalview is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty
* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
* PURPOSE. See the GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with Jalview. If not, see .
* The Jalview Authors are detailed in the 'AUTHORS' file.
*/
package jalview.datamodel;
import static org.testng.Assert.assertTrue;
import java.util.Iterator;
import java.util.NoSuchElementException;
import org.testng.annotations.BeforeClass;
import org.testng.annotations.Test;
public class RangeElementsIteratorTest
{
HiddenColumns hiddenCols;
HiddenColumns hiddenColsAtStart;
@BeforeClass(groups = { "Functional" })
public void setup()
{
hiddenCols = new HiddenColumns();
hiddenCols.hideColumns(2, 4);
hiddenColsAtStart = new HiddenColumns();
hiddenColsAtStart.hideColumns(0, 2);
}
/*
* Test iterator iterates correctly through the columns
* when alignment has hidden cols
*/
@Test(groups = { "Functional" })
public void testHasNextAndNextWithHidden()
{
Iterator it = hiddenCols.getVisibleColsIterator(0, 6);
int count = 0;
while (it.hasNext())
{
int result = it.next();
System.out.println(result);
count++;
}
assertTrue(count == 4, "hasNext() is false after 4 iterations");
}
/*
* Test iterator iterates correctly through the columns
* when alignment has no hidden cols
*/
@Test(groups = { "Functional" })
public void testHasNextAndNextNoHidden()
{
HiddenColumns test = new HiddenColumns();
Iterator it2 = test.getVisibleColsIterator(0, 3);
int count = 0;
while (it2.hasNext())
{
it2.next();
count++;
}
assertTrue(count == 4, "hasNext() is false after 4 iterations");
}
/*
* Test iterator iterates correctly through the columns
* when alignment has hidden cols at start
*/
@Test(groups = { "Functional" })
public void testHasNextAndNextStartHidden()
{
Iterator it3 = hiddenColsAtStart.getVisibleColsIterator(0, 6);
int count = 0;
while (it3.hasNext())
{
it3.next();
count++;
}
assertTrue(count == 4, "hasNext() is false after 4 iterations");
}
/*
* Test iterator iterates correctly through the columns
* when alignment has hidden cols at end
*/
@Test(groups = { "Functional" })
public void testHasNextAndNextEndHidden()
{
Iterator it4 = hiddenCols.getVisibleColsIterator(0, 4);
int count = 0;
while (it4.hasNext())
{
it4.next();
count++;
}
assertTrue(count == 2, "hasNext() is false after 2 iterations");
}
/*
* Test iterator always throws NoSuchElementException at end of iteration
* when alignment has hidden cols
*/
@Test(
groups =
{ "Functional" },
expectedExceptions =
{ NoSuchElementException.class })
public void testLastNextWithHidden() throws NoSuchElementException
{
Iterator it = hiddenCols.getVisibleColsIterator(0, 3);
while (it.hasNext())
{
it.next();
}
it.next();
}
/*
* Test iterator always throws NoSuchElementException at end of iteration
* when alignment has no hidden cols
*/
@Test(
groups =
{ "Functional" },
expectedExceptions =
{ NoSuchElementException.class })
public void testLastNextNoHidden() throws NoSuchElementException
{
HiddenColumns test = new HiddenColumns();
Iterator it2 = test.getVisibleColsIterator(0, 3);
while (it2.hasNext())
{
it2.next();
}
it2.next();
}
/*
* Test iterator always throws NoSuchElementException at end of iteration
* when alignment has hidden cols at start
*/
@Test(
groups =
{ "Functional" },
expectedExceptions =
{ NoSuchElementException.class })
public void testLastNextStartHidden() throws NoSuchElementException
{
Iterator it3 = hiddenColsAtStart.getVisibleColsIterator(0, 6);
while (it3.hasNext())
{
it3.next();
}
it3.next();
}
/*
* Test iterator always throws NoSuchElementException at end of iteration
* when alignment has hidden cols at end
*/
@Test(
groups =
{ "Functional" },
expectedExceptions =
{ NoSuchElementException.class })
public void testLastNextEndHidden() throws NoSuchElementException
{
Iterator it4 = hiddenCols.getVisibleColsIterator(0, 4);
while (it4.hasNext())
{
it4.next();
}
it4.next();
}
/*
* Test calls to remove throw UnsupportedOperationException
*/
@Test(
groups =
{ "Functional" },
expectedExceptions =
{ UnsupportedOperationException.class })
public void testRemove() throws UnsupportedOperationException
{
Iterator it = hiddenCols.getVisibleColsIterator(0, 3);
it.remove();
}
}