/*
* Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
* Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
* Jalview is free software: you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation, either version 3
* of the License, or (at your option) any later version.
*
* Jalview is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty
* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
* PURPOSE. See the GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with Jalview. If not, see .
* The Jalview Authors are detailed in the 'AUTHORS' file.
*/
package jalview.ext.ensembl;
import jalview.datamodel.SequenceFeature;
import jalview.datamodel.SequenceI;
import java.util.ArrayList;
import java.util.List;
/**
* A convenience class to simplify writing unit tests (pending Mockito or
* similar?)
*/
public class EnsemblSeqProxyAdapter extends EnsemblSeqProxy
{
/**
* Default constructor (to use rest.ensembl.org)
*/
public EnsemblSeqProxyAdapter()
{
super();
}
/**
* Constructor given the target domain to fetch data from
*
* @param d
*/
public EnsemblSeqProxyAdapter(String d)
{
super(d);
}
@Override
public String getDbName()
{
return null;
}
@Override
protected EnsemblFeatureType[] getFeaturesToFetch()
{
return null;
}
@Override
protected EnsemblSeqType getSourceEnsemblType()
{
return null;
}
@Override
protected List getIdentifyingFeatures(SequenceI seq,
String accId)
{
return new ArrayList<>();
}
}