/* * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) * Copyright (C) $$Year-Rel$$ The Jalview Authors * * This file is part of Jalview. * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License * as published by the Free Software Foundation, either version 3 * of the License, or (at your option) any later version. * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR * PURPOSE. See the GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with Jalview. If not, see . * The Jalview Authors are detailed in the 'AUTHORS' file. */ package jalview.urls; import static org.testng.AssertJUnit.assertEquals; import static org.testng.AssertJUnit.assertFalse; import static org.testng.AssertJUnit.assertTrue; import jalview.urls.api.UrlProviderI; import jalview.util.UrlConstants; import java.util.Arrays; import java.util.HashMap; import java.util.Vector; import org.testng.annotations.Test; public class CustomUrlProviderTest { private static final String cachedList = "TEST|http://someurl.blah/$DB_ACCESSION$|" + "ANOTHER|http://test/t$SEQUENCE_ID$|" + "TEST2|http://address/$SEQUENCE_ID$|SRS|" + "http://theSRSlink/$SEQUENCE_ID$"; private static final String unselectedList = "NON1|http://x/y/$DB_ACCESSION$|" + "NON2|http://a/b/c/$DB_ACCESSION"; private static final HashMap urlMap = new HashMap() { { put("TEST","http://someurl.blah/$DB_ACCESSION$"); put("ANOTHER","http://test/t$SEQUENCE_ID$"); put("TEST2", "http://address/$SEQUENCE_ID$"); put("SRS", "http://theSRSlink/$SEQUENCE_ID$"); } }; private static final HashMap unselUrlMap = new HashMap() { { put("NON1", "http://x/y/$DB_ACCESSION$"); put("NON2", "http://a/b/c/$DB_ACCESSION"); } }; private static final String[] dlinks = { "TEST|http://someurl.blah/$DB_ACCESSION$", "ANOTHER|http://test/t$SEQUENCE_ID$", "TEST2|http://address/$SEQUENCE_ID$", UrlConstants.DEFAULT_STRING }; private static final String[] unselDlinks = { "NON1|http://x/y/$DB_ACCESSION$", "NON2|http://a/b/c/$DB_ACCESSION" }; private static final Vector displayLinks = new Vector( Arrays.asList(dlinks)); private static final Vector unselDisplayLinks = new Vector( Arrays.asList(unselDlinks)); private static final String[] dlinks2 = { "a|http://x.y.z/$SEQUENCE_ID$" }; private static final Vector displayLinks2 = new Vector( Arrays.asList(dlinks2)); private static final String[] list1 = { "a" }; private static final String[] list2 = { "http://x.y.z/$SEQUENCE_ID$" }; private static final Vector names = new Vector( Arrays.asList(list1)); private static final Vector urls = new Vector( Arrays.asList(list2)); /* * Test default url is set and returned correctly */ @Test(groups = { "Functional" }) public void testDefaultUrl() { UrlProviderI customProv = new CustomUrlProvider(cachedList, unselectedList); // default url can be set assertTrue(customProv.setPrimaryUrl("ANOTHER")); // supplied replacement id must be more than 4 chars String result = customProv.getPrimaryUrl("123"); assertEquals(null, result); // default url can be retrieved given a sequence id result = customProv.getPrimaryUrl("seqid"); assertEquals("http://test/tseqid", result); // if there is no default url it sets the default to null assertFalse(customProv.setPrimaryUrl("No default")); result = customProv.getPrimaryUrl("testid"); assertEquals(null, result); // choosing the default picks the DEFAULT_STRING option customProv.choosePrimaryUrl(); result = customProv.getPrimaryUrl("seqid"); assertEquals( UrlConstants.DEFAULT_STRING.split("\\|")[1].split("\\$")[0] + "seqid", result); } /* * Test urls are set and returned correctly */ @Test(groups = { "Functional" }) public void testUrlLinks() { // creation from cached url list works + old links upgraded UrlProviderI customProv = new CustomUrlProvider(cachedList, unselectedList); assertTrue(displayLinks.containsAll(customProv.getLinksForMenu())); // creation from map works + old links upgraded UrlProviderI customProv2 = new CustomUrlProvider(urlMap, unselUrlMap); assertTrue(displayLinks.containsAll(customProv2.getLinksForMenu())); // writing url links as a string works // because UrlProvider does not guarantee order of links, we can't just // compare the output of writeUrlsAsString to a string, hence the hoops here String result = customProv.writeUrlsAsString(true); UrlProviderI up = new CustomUrlProvider(result, ""); assertTrue(displayLinks.containsAll(up.getLinksForMenu())); result = customProv.writeUrlsAsString(false); up = new CustomUrlProvider("", result); assertTrue(unselDisplayLinks.containsAll(up.getLinksForMenu())); result = customProv2.writeUrlsAsString(true); UrlProviderI up2 = new CustomUrlProvider(result, ""); assertTrue(displayLinks.containsAll(up2.getLinksForMenu())); result = customProv2.writeUrlsAsString(false); up2 = new CustomUrlProvider("", result); assertTrue(displayLinks.containsAll(up2.getLinksForMenu())); } }