/* * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8) * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle * * This file is part of Jalview. * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR * PURPOSE. See the GNU General Public License for more details. * * You should have received a copy of the GNU General Public License along with Jalview. If not, see . */ package jalview.ws.gui; import static org.junit.Assert.assertTrue; import jalview.gui.WsJobParameters; import jalview.ws.jws2.JabaPreset; import jalview.ws.jws2.Jws2Discoverer; import jalview.ws.jws2.jabaws2.Jws2Instance; import java.awt.BorderLayout; import java.awt.event.WindowEvent; import java.awt.event.WindowListener; import java.util.ArrayList; import java.util.Iterator; import java.util.List; import java.util.Vector; import javax.swing.JFrame; import javax.swing.JPanel; import org.junit.Test; import compbio.metadata.Option; import compbio.metadata.Parameter; import compbio.metadata.Preset; import compbio.metadata.PresetManager; public class Jws2ParamView { /** * test servers */ public static String[] serviceUrls = new String[] { "http://localhost:8080/jabaws" }; /** * which services to test */ public static List serviceTests = new ArrayList(); /** * which presets to test for services */ public static List presetTests = new ArrayList(); static { serviceTests.add("AAConWS".toLowerCase()); } @Test public void testJws2Gui() { jalview.ws.jws2.Jws2Discoverer disc = jalview.ws.jws2.Jws2Discoverer .getDiscoverer(); int p = 0; String svcurls=""; Vector services = new Vector(); for (String url : serviceUrls) { svcurls+=url+"; "; services.add(url); } ; Jws2Discoverer.setServiceUrls(services); try { disc.run(); } catch (Exception e) { System.err.println("Aborting. Problem discovering services. Tried "+svcurls); e.printStackTrace(); return; } assertTrue("Failed to discover any services at ", disc.getServices().size() > 0); Jws2Instance lastserv = null; Iterator presetEnum = presetTests.iterator(); for (Jws2Instance service : disc.getServices()) { lastserv = service; if (serviceTests.size() == 0 || serviceTests.contains(service.serviceType.toLowerCase())) { if (lastserv != null) { List prl = null; Preset pr = null; if (presetEnum.hasNext()) { PresetManager prman = lastserv.getPresets(); if (prman != null) { pr = prman.getPresetByName(presetEnum.next()); if (pr == null) { // just grab the last preset. prl = prman.getPresets(); } } } else { PresetManager prman = lastserv.getPresets(); if (prman != null) { prl = prman.getPresets(); } } Iterator en = (prl == null) ? null : prl.iterator(); while (en != null && en.hasNext()) { if (en != null) { if (!en.hasNext()) { en = prl.iterator(); } pr = en.next(); } { System.out.println("Testing opts dupes for " + lastserv.getUri() + " : " + lastserv.getActionText() + ":" + pr.getName()); List