PROBCONS version 1.12 - align multiple protein sequences and print to standard output
Written by Chuong Do

Using parameter set:
    initDistrib[] = { 0.6814756989 8.615339902e-05 8.615339902e-05 0.1591759622 0.1591759622 }
        gapOpen[] = { 0.0119511066 0.0119511066 0.008008334786 0.008008334786 }
      gapExtend[] = { 0.3965826333 0.3965826333 0.8988758326 0.8988758326 }

Loading sequence file: fasta.in
Computing posterior matrix: (1) UniRef90_B7PG68 vs. (2) UniRef90_Q172X8 -- 0.8997189403
Relaxing (1) UniRef90_B7PG68 vs. (2) UniRef90_Q172X8: 482 --> 482 -- done.
Relaxing (1) UniRef90_B7PG68 vs. (2) UniRef90_Q172X8: 482 --> 482 -- done.

Alignment tree: (UniRef90_B7PG68 UniRef90_Q172X8)

[0] vs. [1]: 0.8997189403
[0] vs. [1]: 0.8997189403
[1] vs. [0]: 0.8997189403
[1] vs. [0]: 0.8997189403
[0] vs. [1]: 0.8997189403
[0] vs. [1]: 0.8997189403
[1] vs. [0]: 0.8997189403
[0] vs. [1]: 0.8997189403
[0] vs. [1]: 0.8997189403
[0] vs. [1]: 0.8997189403
[1] vs. [0]: 0.8997189403
[0] vs. [1]: 0.8997189403
[0] vs. [1]: 0.8997189403
[0] vs. [1]: 0.8997189403
[1] vs. [0]: 0.8997189403
[1] vs. [0]: 0.8997189403
[1] vs. [0]: 0.8997189403
[1] vs. [0]: 0.8997189403
[1] vs. [0]: 0.8997189403
[1] vs. [0]: 0.8997189403
[1] vs. [0]: 0.8997189403
[1] vs. [0]: 0.8997189403
[0] vs. [1]: 0.8997189403
[0] vs. [1]: 0.8997189403
[1] vs. [0]: 0.8997189403
[0] vs. [1]: 0.8997189403
[1] vs. [0]: 0.8997189403
[0] vs. [1]: 0.8997189403
[0] vs. [1]: 0.8997189403
[0] vs. [1]: 0.8997189403
[0] vs. [1]: 0.8997189403
[1] vs. [0]: 0.8997189403
[1] vs. [0]: 0.8997189403
[1] vs. [0]: 0.8997189403
[0] vs. [1]: 0.8997189403
[1] vs. [0]: 0.8997189403
[1] vs. [0]: 0.8997189403
[0] vs. [1]: 0.8997189403
[1] vs. [0]: 0.8997189403
[1] vs. [0]: 0.8997189403
[1] vs. [0]: 0.8997189403
[1] vs. [0]: 0.8997189403
[1] vs. [0]: 0.8997189403
[1] vs. [0]: 0.8997189403
[1] vs. [0]: 0.8997189403
[0] vs. [1]: 0.8997189403
[0] vs. [1]: 0.8997189403
[0] vs. [1]: 0.8997189403
[0] vs. [1]: 0.8997189403
[0] vs. [1]: 0.8997189403
[1] vs. [0]: 0.8997189403
[0] vs. [1]: 0.8997189403
[1] vs. [0]: 0.8997189403
[1] vs. [0]: 0.8997189403
[1] vs. [0]: 0.8997189403