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Parameter
<
T
> - Class in
compbio.metadata
A single value containing an option supported by the web service e.g.
Parameter(String, String)
- Constructor for class compbio.metadata.
Parameter
Preset
<
T
> - Class in
compbio.metadata
Collection of Options and Parameters with their values
Preset()
- Constructor for class compbio.metadata.
Preset
PresetAlign
- Class in
compbio.data.msa.jaxws
PresetAlign()
- Constructor for class compbio.data.msa.jaxws.
PresetAlign
presetAlign(List<FastaSequence>, Preset<T>)
- Method in interface compbio.data.msa.
MsaWS
Align a list of sequences with preset.
PresetAlignResponse
- Class in
compbio.data.msa.jaxws
PresetAlignResponse()
- Constructor for class compbio.data.msa.jaxws.
PresetAlignResponse
PresetAnalize
- Class in
compbio.data.msa.jaxws
PresetAnalize()
- Constructor for class compbio.data.msa.jaxws.
PresetAnalize
presetAnalize(List<FastaSequence>, Preset<T>)
- Method in interface compbio.data.msa.
SequenceAnnotation
Analyse the sequences according to the preset settings.
PresetAnalizeResponse
- Class in
compbio.data.msa.jaxws
PresetAnalizeResponse()
- Constructor for class compbio.data.msa.jaxws.
PresetAnalizeResponse
PresetManager
<
T
> - Class in
compbio.metadata
Collection of presets and methods to manipulate them @see
Preset
PresetManager()
- Constructor for class compbio.metadata.
PresetManager
PROBCONS_INFO
- Static variable in enum compbio.ws.client.
Services
Program
- Enum in
compbio.data.sequence
The list of programmes that can produce alignments
PullExecStatistics
- Class in
compbio.data.msa.jaxws
PullExecStatistics()
- Constructor for class compbio.data.msa.jaxws.
PullExecStatistics
pullExecStatistics(String, long)
- Method in interface compbio.data.msa.
JManagement
Reads 1kb chunk from the statistics file which is specific to a given web service from the
position
.
PullExecStatisticsResponse
- Class in
compbio.data.msa.jaxws
PullExecStatisticsResponse()
- Constructor for class compbio.data.msa.jaxws.
PullExecStatisticsResponse
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