public enum SMERFSConstraints extends java.lang.Enum<SMERFSConstraints>
Modifier and Type | Field and Description |
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static SMERFSConstraints |
DEFAULT_COLUMN_SCORE
Default column scoring schema
|
static double |
DEFAULT_GAP_THRESHOLD
Default gap threshold value for SMERFS algorithm
|
static int |
DEFAULT_WINDOW_SIZE
Default window size value for SMERFS algorithm
|
Modifier and Type | Method and Description |
---|---|
static SMERFSConstraints |
getSMERFSColumnScore(java.lang.String score) |
static SMERFSConstraints |
valueOf(java.lang.String name)
Returns the enum constant of this type with the specified name.
|
static SMERFSConstraints[] |
values()
Returns an array containing the constants of this enum type, in
the order they are declared.
|
public static final SMERFSConstraints MAX_SCORE
public static final SMERFSConstraints MID_SCORE
public static final SMERFSConstraints DEFAULT_COLUMN_SCORE
public static final int DEFAULT_WINDOW_SIZE
public static final double DEFAULT_GAP_THRESHOLD
public static SMERFSConstraints[] values()
for (SMERFSConstraints c : SMERFSConstraints.values()) System.out.println(c);
public static SMERFSConstraints valueOf(java.lang.String name)
name
- the name of the enum constant to be returned.java.lang.IllegalArgumentException
- if this enum type has no constant with the specified namejava.lang.NullPointerException
- if the argument is nullpublic static SMERFSConstraints getSMERFSColumnScore(java.lang.String score)