- V2_SERVICE_NAMESPACE - Static variable in interface compbio.data.msa.JABAService
-
- V3_SERVICE_NAMESPACE - Static variable in interface compbio.data.msa.JABAService
-
- validate(Validator, String) - Static method in class compbio.engine.conf.RunnerConfigMarshaller
-
- validate() - Method in class compbio.metadata.Limit
-
- validate(PresetManager<T>) - Method in class compbio.metadata.LimitsManager
-
Validate Limits
- validate() - Method in class compbio.metadata.Option
-
Validate the option
- validate() - Method in class compbio.metadata.Parameter
-
- validate(RunnerConfig<T>) - Method in class compbio.metadata.PresetManager
-
Checks whether preset option and parameter are defined in RunnerConfig
object.
- validate() - Method in class compbio.metadata.RunnerConfig
-
Validate the value of the argument.
- validate() - Method in class compbio.metadata.ValueConstrain
-
Validate the ValueConstrain object.
- validate() - Method in class compbio.stat.collector.JobStat
-
- validateAAConInput(List<FastaSequence>) - Static method in class compbio.ws.server.WSUtil
-
- validateDirectory(String) - Static method in class compbio.engine.client.PathValidator
-
- validateExecutable(String) - Static method in class compbio.engine.client.PathValidator
-
- validateFastaInput(List<FastaSequence>) - Static method in class compbio.ws.server.WSUtil
-
- validateJobId(String) - Static method in class compbio.ws.server.WSUtil
-
- validatePathNames(List<String>, String) - Static method in class compbio.engine.client.PathValidator
-
- validURL(String) - Static method in class compbio.ws.client.Jws2Client
-
Attempt to construct the URL object from the string
- validValue - Variable in class compbio.metadata.Parameter
-
- value - Variable in class compbio.engine.client.CommandBuilder.Parameter
-
- ValueConstrain - Class in compbio.metadata
-
The type and the lower and upper boundaries for numerical value.
- ValueConstrain() - Constructor for class compbio.metadata.ValueConstrain
-
- ValueConstrain.Type - Enum in compbio.metadata
-
- valueExist(String, List<String>) - Static method in class compbio.metadata.Option
-
- valueOf(String) - Static method in enum compbio.data.sequence.ConservationMethod
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum compbio.data.sequence.DisemblResult
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum compbio.data.sequence.DisorderMethod
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum compbio.data.sequence.GlobProtResult
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum compbio.data.sequence.IUPredResult
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum compbio.data.sequence.Program
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum compbio.data.sequence.RNAStructReader.AlifoldLine
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum compbio.data.sequence.RNAStructReader.AlifoldResult
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum compbio.data.sequence.RNAStructReader.RNAOut
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum compbio.data.sequence.SMERFSConstraints
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum compbio.engine.client.Executable.ExecProvider
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum compbio.engine.local.StreamGobbler.OutputType
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum compbio.metadata.JobStatus
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum compbio.metadata.ValueConstrain.Type
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum compbio.stat.servlet.util.StatCollection.Stattype
-
Returns the enum constant of this type with the specified name.
- valueOf(String) - Static method in enum compbio.ws.client.Services
-
Returns the enum constant of this type with the specified name.
- values() - Static method in enum compbio.data.sequence.ConservationMethod
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum compbio.data.sequence.DisemblResult
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum compbio.data.sequence.DisorderMethod
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum compbio.data.sequence.GlobProtResult
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum compbio.data.sequence.IUPredResult
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum compbio.data.sequence.Program
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum compbio.data.sequence.RNAStructReader.AlifoldLine
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum compbio.data.sequence.RNAStructReader.AlifoldResult
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum compbio.data.sequence.RNAStructReader.RNAOut
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum compbio.data.sequence.SMERFSConstraints
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum compbio.engine.client.Executable.ExecProvider
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum compbio.engine.local.StreamGobbler.OutputType
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum compbio.metadata.JobStatus
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum compbio.metadata.ValueConstrain.Type
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum compbio.stat.servlet.util.StatCollection.Stattype
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- values() - Static method in enum compbio.ws.client.Services
-
Returns an array containing the constants of this enum type, in
the order they are declared.
- version - Variable in class compbio.stat.servlet.ServiceTestResult
-
- version - Variable in class compbio.ws.client.Services.ServiceInfo
-
- VERSION_TYPE - Static variable in class compbio.ws.server.GAUtils
-
- vmem - Variable in class compbio.engine.cluster.drmaa.StatisticManager
-