compbio.engine.client
Class Util

java.lang.Object
  compbio.engine.client.Util

public final class Util
extends java.lang.Object

Constructor Summary

Util()

Method Summary

static java.lang.String	convertToAbsolute(java.lang.String relativePath)
static java.lang.String	getCommand(Executable.ExecProvider provider, java.lang.Class<?> clazz)
static java.lang.String	getExecProperty(java.lang.String propertySpec, java.lang.Class<?> clazz)
static java.lang.String	getExecProperty(java.lang.String propertySpec, Executable<?> exec)
static java.lang.String	getFullPath(java.lang.String workDirectory, java.lang.String fileName)
static Executable.ExecProvider	getSupportedRuntimes(java.lang.Class<?> clazz)
static boolean	isMarked(java.lang.String workDirectory, JobStatus marker)
static boolean	isValidJobId(java.lang.String key)
static ConfiguredExecutable<?>	loadExecutable(java.lang.String taskId)
static java.util.Map<java.lang.String,java.lang.String>	mergeEnvVariables(java.util.Map<java.lang.String,java.lang.String> sysEnvTobeModified, java.util.Map<java.lang.String,java.lang.String> variables)
static void	writeFile(java.lang.String workDirectory, java.lang.String fileAndEventName, java.lang.String content, boolean override)
static boolean	writeMarker(java.lang.String workDirectory, JobStatus fileType)
static void	writeStatFile(java.lang.String workDirectory, java.lang.String fileAndEventName)

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Util

public Util()

Method Detail

isValidJobId

public static boolean isValidJobId(java.lang.String key)

writeStatFile

public static void writeStatFile(java.lang.String workDirectory,
                                 java.lang.String fileAndEventName)

writeFile

public static void writeFile(java.lang.String workDirectory,
                             java.lang.String fileAndEventName,
                             java.lang.String content,
                             boolean override)

writeMarker

public static final boolean writeMarker(java.lang.String workDirectory,
                                        JobStatus fileType)

isMarked

public static boolean isMarked(java.lang.String workDirectory,
                               JobStatus marker)

mergeEnvVariables

public static java.util.Map<java.lang.String,java.lang.String> mergeEnvVariables(java.util.Map<java.lang.String,java.lang.String> sysEnvTobeModified,
                                                                                 java.util.Map<java.lang.String,java.lang.String> variables)

convertToAbsolute

public static java.lang.String convertToAbsolute(java.lang.String relativePath)

getExecProperty

public static java.lang.String getExecProperty(java.lang.String propertySpec,
                                               Executable<?> exec)

getExecProperty

public static java.lang.String getExecProperty(java.lang.String propertySpec,
                                               java.lang.Class<?> clazz)

getFullPath

public static java.lang.String getFullPath(java.lang.String workDirectory,
                                           java.lang.String fileName)

getCommand

public static java.lang.String getCommand(Executable.ExecProvider provider,
                                          java.lang.Class<?> clazz)

getSupportedRuntimes

public static Executable.ExecProvider getSupportedRuntimes(java.lang.Class<?> clazz)

loadExecutable

public static ConfiguredExecutable<?> loadExecutable(java.lang.String taskId)
                                              throws ResultNotAvailableException

Throws:

ResultNotAvailableException