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Packages that use Executable.ExecProvider | |
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compbio.engine | |
compbio.engine.client | Classes and interfaces representing an input for engines. |
compbio.runner | Utilities commonly used by all runners. |
compbio.runner._impl | |
compbio.runner.msa | Wrappers for native executables for multiple sequence alignment (msa) |
Uses of Executable.ExecProvider in compbio.engine |
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Methods in compbio.engine that return Executable.ExecProvider | ||
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static Executable.ExecProvider |
LoadBalancer.getEngine(Executable<?> executable)
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static
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LoadBalancer.getEngine(Executable<V> executable,
java.util.List<FastaSequence> dataSet)
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Methods in compbio.engine with parameters of type Executable.ExecProvider | ||
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static
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Configurator.configureExecutable(Executable<T> executable,
Executable.ExecProvider provider)
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static AsyncExecutor |
Configurator.getAsyncEngine(ConfiguredExecutable<?> executable,
Executable.ExecProvider provider)
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static SyncExecutor |
Configurator.getSyncEngine(ConfiguredExecutable<?> executable,
Executable.ExecProvider provider)
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Uses of Executable.ExecProvider in compbio.engine.client |
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Methods in compbio.engine.client that return Executable.ExecProvider | |
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Executable.ExecProvider |
ConfiguredExecutable.getExecProvider()
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Executable.ExecProvider |
ConfExecutable.getExecProvider()
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Executable.ExecProvider |
ConfiguredExecutable.getSupportedRuntimes()
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Executable.ExecProvider |
ConfExecutable.getSupportedRuntimes()
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static Executable.ExecProvider |
Util.getSupportedRuntimes(java.lang.Class<?> clazz)
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static Executable.ExecProvider |
Executable.ExecProvider.valueOf(java.lang.String name)
Returns the enum constant of this type with the specified name. |
static Executable.ExecProvider[] |
Executable.ExecProvider.values()
Returns an array containing the constants of this enum type, in the order they are declared. |
Methods in compbio.engine.client with parameters of type Executable.ExecProvider | |
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java.lang.String |
ConfiguredExecutable.getCommand(Executable.ExecProvider provider)
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java.lang.String |
ConfExecutable.getCommand(Executable.ExecProvider provider)
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static java.lang.String |
Util.getCommand(Executable.ExecProvider provider,
java.lang.Class<?> clazz)
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CommandBuilder<T> |
SkeletalExecutable.getParameters(Executable.ExecProvider provider)
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CommandBuilder<T> |
Executable.getParameters(Executable.ExecProvider provider)
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CommandBuilder<T> |
ConfExecutable.getParameters(Executable.ExecProvider provider)
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void |
ConfExecutable.setExecProvider(Executable.ExecProvider provider)
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Uses of Executable.ExecProvider in compbio.runner |
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Methods in compbio.runner with parameters of type Executable.ExecProvider | |
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CommandBuilder<_SkeletalCommandBuilder> |
_SkeletalCommandBuilder.getParameters(Executable.ExecProvider provider)
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Uses of Executable.ExecProvider in compbio.runner._impl |
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Methods in compbio.runner._impl with parameters of type Executable.ExecProvider | |
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java.lang.String |
Mcl.getCommand(Executable.ExecProvider provider)
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java.lang.String |
BlastAll.getCommand(Executable.ExecProvider provider)
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java.lang.String |
RPSBlast.getCommand(Executable.ExecProvider provider)
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java.lang.String |
Ronn.getCommand(Executable.ExecProvider provider)
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java.lang.String |
PSIBlast.getCommand(Executable.ExecProvider provider)
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java.lang.String |
Disembl.getCommand(Executable.ExecProvider provider)
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CommandBuilder<NetNglyc> |
NetNglyc.getParameters(Executable.ExecProvider provider)
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Uses of Executable.ExecProvider in compbio.runner.msa |
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Methods in compbio.runner.msa with parameters of type Executable.ExecProvider | |
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CommandBuilder<Tcoffee> |
Tcoffee.getParameters(Executable.ExecProvider provider)
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