Uses of Class
compbio.metadata.LimitsManager

Packages that use LimitsManager

compbio.data.msa
compbio.data.msa.jaxws
compbio.engine.client	Classes and interfaces representing an input for engines.
compbio.runner	Utilities commonly used by all runners.
compbio.runner._impl
compbio.runner.msa	Wrappers for native executables for multiple sequence alignment (msa)
compbio.runner.psiblast
compbio.ws.server

Uses of LimitsManager in compbio.data.msa

Methods in compbio.data.msa that return LimitsManager

LimitsManager<T>

MsaWS.getLimits() List Limits supported by a web service.

Uses of LimitsManager in compbio.data.msa.jaxws

Methods in compbio.data.msa.jaxws that return LimitsManager

LimitsManager

GetLimitsResponse.getReturn()

Methods in compbio.data.msa.jaxws with parameters of type LimitsManager

void	GetLimitsResponse.setReturn(LimitsManager _return)

Uses of LimitsManager in compbio.engine.client

Methods in compbio.engine.client that return LimitsManager

LimitsManager<T>	Executable.getLimits()
LimitsManager<T>	ConfExecutable.getLimits()
static <V> LimitsManager<V>	ConfExecutable.getRunnerLimits(java.lang.Class<? extends Executable<V>> clazz) This method should be executed once and result of its execution reused.

Uses of LimitsManager in compbio.runner

Methods in compbio.runner that return LimitsManager

LimitsManager<_SkeletalCommandBuilder>	_SkeletalCommandBuilder.getLimits()
static <T> LimitsManager<T>	Util.getLimits(java.lang.Class<? extends Executable<T>> clazz) For now just assume that all parameters which came in needs setting it will be a client responsibility to prepare RunnerConfig object then

Uses of LimitsManager in compbio.runner._impl

Methods in compbio.runner._impl that return LimitsManager

LimitsManager<NetNglyc>

NetNglyc.getLimits()

Uses of LimitsManager in compbio.runner.msa

Methods in compbio.runner.msa that return LimitsManager

LimitsManager<Tcoffee>	Tcoffee.getLimits()
LimitsManager<ClustalW>	ClustalW.getLimits()
LimitsManager<Probcons>	Probcons.getLimits()
LimitsManager<Muscle>	Muscle.getLimits()
LimitsManager<Mafft>	Mafft.getLimits()

Uses of LimitsManager in compbio.runner.psiblast

Methods in compbio.runner.psiblast that return LimitsManager

LimitsManager<PsiBlast>

PsiBlast.getLimits()

Uses of LimitsManager in compbio.ws.server

Methods in compbio.ws.server that return LimitsManager

LimitsManager<Tcoffee>	TcoffeeWS.getLimits()
LimitsManager<Probcons>	ProbconsWS.getLimits()
LimitsManager<Muscle>	MuscleWS.getLimits()
LimitsManager<Mafft>	MafftWS.getLimits()
LimitsManager<ClustalW>	ClustalWS.getLimits()