Uses of Class
compbio.metadata.WrongParameterException

Packages that use WrongParameterException

compbio.data.msa
compbio.metadata	A meta-data model for multiple sequence alignment web services Classes in this package have no dependencies to other sources in the project.
compbio.ws.server

Uses of WrongParameterException in compbio.data.msa

Methods in compbio.data.msa that throw WrongParameterException

java.lang.String	MsaWS.customAlign(java.util.List<FastaSequence> sequences, java.util.List<Option<T>> options) Align a list of sequences with options.
java.lang.String	MsaWS.presetAlign(java.util.List<FastaSequence> sequences, Preset<T> preset) Align a list of sequences with preset.

Uses of WrongParameterException in compbio.metadata

Methods in compbio.metadata that throw WrongParameterException

java.util.List<Option<T>>	Preset.getArguments(RunnerConfig<T> rconfig) Converts list of options as String to type Option
void	Parameter.setDefaultValue(java.lang.String defaultVal)
void	Option.setDefaultValue(java.lang.String defaultVal) Sets one of the values defined in optionList as default.
void	Argument.setValue(java.lang.String defaultValue) Set default values for the parameter or an option
void	Option.setValue(java.lang.String dValue)

Uses of WrongParameterException in compbio.ws.server

Methods in compbio.ws.server that throw WrongParameterException

java.lang.String	ClustalWS.customAlign(java.util.List<FastaSequence> sequences, java.util.List<Option<ClustalW>> options)
java.lang.String	MafftWS.customAlign(java.util.List<FastaSequence> sequences, java.util.List<Option<Mafft>> options)
java.lang.String	MuscleWS.customAlign(java.util.List<FastaSequence> sequences, java.util.List<Option<Muscle>> options)
java.lang.String	ProbconsWS.customAlign(java.util.List<FastaSequence> sequences, java.util.List<Option<Probcons>> options)
java.lang.String	TcoffeeWS.customAlign(java.util.List<FastaSequence> sequences, java.util.List<Option<Tcoffee>> options)
java.lang.String	ClustalWS.presetAlign(java.util.List<FastaSequence> sequences, Preset<ClustalW> preset)
java.lang.String	MafftWS.presetAlign(java.util.List<FastaSequence> sequences, Preset<Mafft> preset)
java.lang.String	MuscleWS.presetAlign(java.util.List<FastaSequence> sequences, Preset<Muscle> preset)
java.lang.String	ProbconsWS.presetAlign(java.util.List<FastaSequence> sequences, Preset<Probcons> preset)
java.lang.String	TcoffeeWS.presetAlign(java.util.List<FastaSequence> sequences, Preset<Tcoffee> preset)