Package compbio.pipeline._jpred

Class Summary

BlastBlastComparator
BlastHmmerComparator
BlastParser
Hit
Hit.EvalueComporator
Hit.NumberComporator
JackHmmerHitParser	Parser for the following files:
Jpred4	jpred --sequence OR --alignment [--db ] [--pred-nohits] [--logLevel=(ERROR|INFO|DEBUG)] [--help] jpred4 --sequence The path to the sequence (in FASTA format) you want to predict OR [--alignment ] The alignment which to use for prediction [--profile=] [--db ] Database to use for PSI-BLAST querying.
Pairwise
PScore