<!DOCTYPE suite SYSTEM "http://testng.org/testng-1.0.dtd">
<suite thread-count="5" skipfailedinvocationCounts="false" verbose="3" name="Ant suite" junit="false" annotations="JDK" data-provider-thread-count="10">
<test name="Ant test" junit="false">
<groups>
<run>
<exclude name="performance"/>
<exclude name="webservices"/>
</run>
</groups>
<classes>
<class name="compbio.data._structure.JnetAnnotation$AType"/>
<class name="compbio.data._structure.JnetAnnotation"/>
<class name="compbio.data._structure.JpredAnnotation"/>
<class name="compbio.data._structure.JpredResult"/>
<class name="compbio.data.msa.JABAService"/>
<class name="compbio.data.msa.JManagement"/>
<class name="compbio.data.msa.Metadata"/>
<class name="compbio.data.msa.MsaWS"/>
<class name="compbio.data.msa.RegistryWS"/>
<class name="compbio.data.msa.SequenceAnnotation"/>
<class name="compbio.data.msa.jaxws.Align"/>
<class name="compbio.data.msa.jaxws.AlignResponse"/>
<class name="compbio.data.msa.jaxws.Analize"/>
<class name="compbio.data.msa.jaxws.AnalizeResponse"/>
<class name="compbio.data.msa.jaxws.CancelJob"/>
<class name="compbio.data.msa.jaxws.CancelJobResponse"/>
<class name="compbio.data.msa.jaxws.CustomAlign"/>
<class name="compbio.data.msa.jaxws.CustomAlignResponse"/>
<class name="compbio.data.msa.jaxws.CustomAnalize"/>
<class name="compbio.data.msa.jaxws.CustomAnalizeResponse"/>
<class name="compbio.data.msa.jaxws.GetAnnotation"/>
<class name="compbio.data.msa.jaxws.GetAnnotationResponse"/>
<class name="compbio.data.msa.jaxws.GetConservation"/>
<class name="compbio.data.msa.jaxws.GetConservationResponse"/>
<class name="compbio.data.msa.jaxws.GetJobStatus"/>
<class name="compbio.data.msa.jaxws.GetJobStatusResponse"/>
<class name="compbio.data.msa.jaxws.GetLastTested"/>
<class name="compbio.data.msa.jaxws.GetLastTestedOn"/>
<class name="compbio.data.msa.jaxws.GetLastTestedOnResponse"/>
<class name="compbio.data.msa.jaxws.GetLastTestedResponse"/>
<class name="compbio.data.msa.jaxws.GetLimit"/>
<class name="compbio.data.msa.jaxws.GetLimitResponse"/>
<class name="compbio.data.msa.jaxws.GetLimits"/>
<class name="compbio.data.msa.jaxws.GetLimitsResponse"/>
<class name="compbio.data.msa.jaxws.GetPresets"/>
<class name="compbio.data.msa.jaxws.GetPresetsResponse"/>
<class name="compbio.data.msa.jaxws.GetResult"/>
<class name="compbio.data.msa.jaxws.GetResultResponse"/>
<class name="compbio.data.msa.jaxws.GetRunnerOptions"/>
<class name="compbio.data.msa.jaxws.GetRunnerOptionsResponse"/>
<class name="compbio.data.msa.jaxws.GetSupportedServices"/>
<class name="compbio.data.msa.jaxws.GetSupportedServicesResponse"/>
<class name="compbio.data.msa.jaxws.IsOperating"/>
<class name="compbio.data.msa.jaxws.IsOperatingResponse"/>
<class name="compbio.data.msa.jaxws.JobSubmissionExceptionBean"/>
<class name="compbio.data.msa.jaxws.LimitExceededExceptionBean"/>
<class name="compbio.data.msa.jaxws.PresetAlign"/>
<class name="compbio.data.msa.jaxws.PresetAlignResponse"/>
<class name="compbio.data.msa.jaxws.PresetAnalize"/>
<class name="compbio.data.msa.jaxws.PresetAnalizeResponse"/>
<class name="compbio.data.msa.jaxws.PullExecStatistics"/>
<class name="compbio.data.msa.jaxws.PullExecStatisticsResponse"/>
<class name="compbio.data.msa.jaxws.ResultNotAvailableExceptionBean"/>
<class name="compbio.data.msa.jaxws.TestAllServices"/>
<class name="compbio.data.msa.jaxws.TestAllServicesResponse"/>
<class name="compbio.data.msa.jaxws.TestService"/>
<class name="compbio.data.msa.jaxws.TestServiceResponse"/>
<class name="compbio.data.msa.jaxws.UnsupportedRuntimeExceptionBean"/>
<class name="compbio.data.msa.jaxws.WrongParameterExceptionBean"/>
<class name="compbio.data.sequence.Alignment"/>
<class name="compbio.data.sequence.AlignmentMetadata"/>
<class name="compbio.data.sequence.ClustalAlignmentUtil"/>
<class name="compbio.data.sequence.ClustalAlignmentUtilTester"/>
<class name="compbio.data.sequence.ConservationMethod"/>
<class name="compbio.data.sequence.DisemblResult"/>
<class name="compbio.data.sequence.DisorderMethod"/>
<class name="compbio.data.sequence.FastaGeneratorManager"/>
<class name="compbio.data.sequence.FastaReader$1"/>
<class name="compbio.data.sequence.FastaReader"/>
<class name="compbio.data.sequence.FastaReaderTester"/>
<class name="compbio.data.sequence.FastaSequence"/>
<class name="compbio.data.sequence.FastaSequenceGenerator$1"/>
<class name="compbio.data.sequence.FastaSequenceGenerator$DNAAlphabet"/>
<class name="compbio.data.sequence.FastaSequenceGenerator$Letters"/>
<class name="compbio.data.sequence.FastaSequenceGenerator$ProteinAlphabet"/>
<class name="compbio.data.sequence.FastaSequenceGenerator$SeqType"/>
<class name="compbio.data.sequence.FastaSequenceGenerator"/>
<class name="compbio.data.sequence.FastaSequenceGeneratorTester"/>
<class name="compbio.data.sequence.FastaSequenceTester"/>
<class name="compbio.data.sequence.GlobProtResult"/>
<class name="compbio.data.sequence.IUPredResult"/>
<class name="compbio.data.sequence.Program"/>
<class name="compbio.data.sequence.Range"/>
<class name="compbio.data.sequence.SMERFSConstraints"/>
<class name="compbio.data.sequence.Score"/>
<class name="compbio.data.sequence.ScoreManager$ScoreHolder"/>
<class name="compbio.data.sequence.ScoreManager"/>
<class name="compbio.data.sequence.SequenceUtil"/>
<class name="compbio.data.sequence.SequenceUtilTester$Trial"/>
<class name="compbio.data.sequence.SequenceUtilTester"/>
<class name="compbio.data.sequence.UnknownFileFormatException"/>
<class name="compbio.engine.AsyncExecutor"/>
<class name="compbio.engine.Cleaner"/>
<class name="compbio.engine.ClusterJobId"/>
<class name="compbio.engine.Configurator"/>
<class name="compbio.engine.EngineConfiguratorTester"/>
<class name="compbio.engine.FilePuller"/>
<class name="compbio.engine.FilePullerTester"/>
<class name="compbio.engine.Job"/>
<class name="compbio.engine.LoadBalancer"/>
<class name="compbio.engine.LoadBalancerTester"/>
<class name="compbio.engine.ProgressGetter"/>
<class name="compbio.engine.PulledFileCache"/>
<class name="compbio.engine.PulledFileCacheTester"/>
<class name="compbio.engine.SubmissionManager"/>
<class name="compbio.engine.SyncExecutor"/>
<class name="compbio.engine.client.CommandBuilder$Parameter"/>
<class name="compbio.engine.client.CommandBuilder"/>
<class name="compbio.engine.client.CommandBuilderTester"/>
<class name="compbio.engine.client.ConfExecutable"/>
<class name="compbio.engine.client.ConfiguredExecutable"/>
<class name="compbio.engine.client.EnvVariableProcessor"/>
<class name="compbio.engine.client.Executable$ExecProvider"/>
<class name="compbio.engine.client.Executable"/>
<class name="compbio.engine.client.PathValidator"/>
<class name="compbio.engine.client.PathValidatorTester"/>
<class name="compbio.engine.client.PipedExecutable"/>
<class name="compbio.engine.client.RunConfiguration"/>
<class name="compbio.engine.client.SkeletalExecutable"/>
<class name="compbio.engine.client.Util"/>
<class name="compbio.engine.cluster.drmaa.AsyncJobRunner"/>
<class name="compbio.engine.cluster.drmaa.ClusterSession$1"/>
<class name="compbio.engine.cluster.drmaa.ClusterSession"/>
<class name="compbio.engine.cluster.drmaa.ClusterSessionTester"/>
<class name="compbio.engine.cluster.drmaa.ClusterUtil"/>
<class name="compbio.engine.cluster.drmaa.DrmaaAsyncClusterEngineTester"/>
<class name="compbio.engine.cluster.drmaa.DrmaaClusterEngineTester"/>
<class name="compbio.engine.cluster.drmaa.JobRunner"/>
<class name="compbio.engine.cluster.drmaa.StatisticManager"/>
<class name="compbio.engine.cluster.drmaa.UtilTester"/>
<class name="compbio.engine.cluster.drmaa._DrmaaExample"/>
<class name="compbio.engine.cluster.drmaa._JobStatus"/>
<class name="compbio.engine.cluster.dundee._Queue$1"/>
<class name="compbio.engine.cluster.dundee._Queue"/>
<class name="compbio.engine.cluster.dundee._QueueConstraints"/>
<class name="compbio.engine.cluster.dundee._QueueTester"/>
<class name="compbio.engine.conf.DirectoryManager"/>
<class name="compbio.engine.conf.DirectoryManagerTester"/>
<class name="compbio.engine.conf.PropertyHelperManager"/>
<class name="compbio.engine.conf.PropertyHelperManagerTester"/>
<class name="compbio.engine.conf.RunnerConfigMarshaller$MySchemaOutputResolver"/>
<class name="compbio.engine.conf.RunnerConfigMarshaller"/>
<class name="compbio.engine.conf.RunnerConfigMarshallerTester"/>
<class name="compbio.engine.conf._Key"/>
<class name="compbio.engine.local.AsyncLocalRunner"/>
<class name="compbio.engine.local.AsyncLocalRunnerTester"/>
<class name="compbio.engine.local.EngineResourcesLeakTester"/>
<class name="compbio.engine.local.ExecutableWrapper$1"/>
<class name="compbio.engine.local.ExecutableWrapper"/>
<class name="compbio.engine.local.LocalEngineUtil"/>
<class name="compbio.engine.local.LocalExecutorService$1"/>
<class name="compbio.engine.local.LocalExecutorService"/>
<class name="compbio.engine.local.LocalRunner"/>
<class name="compbio.engine.local.LocalRunnerTester"/>
<class name="compbio.engine.local.StreamGobbler$OutputType"/>
<class name="compbio.engine.local.StreamGobbler"/>
<class name="compbio.engine.local._TrackingExecutor$1"/>
<class name="compbio.engine.local._TrackingExecutor$2"/>
<class name="compbio.engine.local._TrackingExecutor"/>
<class name="compbio.metadata.AllTestSuit"/>
<class name="compbio.metadata.Argument"/>
<class name="compbio.metadata.ChunkHolder"/>
<class name="compbio.metadata.JobExecutionException"/>
<class name="compbio.metadata.JobStatus"/>
<class name="compbio.metadata.JobSubmissionException"/>
<class name="compbio.metadata.Limit"/>
<class name="compbio.metadata.LimitExceededException"/>
<class name="compbio.metadata.LimitsManager"/>
<class name="compbio.metadata.Option"/>
<class name="compbio.metadata.OptionCombinatorTester"/>
<class name="compbio.metadata.OptionMarshallerTester"/>
<class name="compbio.metadata.Parameter"/>
<class name="compbio.metadata.Preset"/>
<class name="compbio.metadata.PresetManager"/>
<class name="compbio.metadata.PresetTester"/>
<class name="compbio.metadata.ResultNotAvailableException"/>
<class name="compbio.metadata.RunnerConfig"/>
<class name="compbio.metadata.RunnerConfigTester"/>
<class name="compbio.metadata.UnsupportedRuntimeException"/>
<class name="compbio.metadata.ValueConstrain$1"/>
<class name="compbio.metadata.ValueConstrain$Type"/>
<class name="compbio.metadata.ValueConstrain"/>
<class name="compbio.metadata.WrongParameterException"/>
<class name="compbio.pipeline._jpred.BlastBlastComparator"/>
<class name="compbio.pipeline._jpred.BlastHmmerComparator"/>
<class name="compbio.pipeline._jpred.BlastParser"/>
<class name="compbio.pipeline._jpred.Hit$EvalueComporator"/>
<class name="compbio.pipeline._jpred.Hit$NumberComporator"/>
<class name="compbio.pipeline._jpred.Hit"/>
<class name="compbio.pipeline._jpred.JackHmmerHitParser"/>
<class name="compbio.pipeline._jpred.Jpred4"/>
<class name="compbio.pipeline._jpred.PScore"/>
<class name="compbio.pipeline._jpred.Pairwise"/>
<class name="compbio.runner.OptionCombinator"/>
<class name="compbio.runner.Util"/>
<class name="compbio.runner._NativeSpecHelper"/>
<class name="compbio.runner._SkeletalCommandBuilder"/>
<class name="compbio.runner._impl.BlastAll$blastType"/>
<class name="compbio.runner._impl.BlastAll$dataBase"/>
<class name="compbio.runner._impl.BlastAll"/>
<class name="compbio.runner._impl.BlastParameters"/>
<class name="compbio.runner._impl.Environment"/>
<class name="compbio.runner._impl.Mcl"/>
<class name="compbio.runner._impl.MclTester"/>
<class name="compbio.runner._impl.NetNglyc"/>
<class name="compbio.runner._impl.NetNglycTester"/>
<class name="compbio.runner._impl.OB"/>
<class name="compbio.runner._impl.OBTester"/>
<class name="compbio.runner._impl.PSIBlast$blastType"/>
<class name="compbio.runner._impl.PSIBlast$dataBase"/>
<class name="compbio.runner._impl.PSIBlast"/>
<class name="compbio.runner._impl.RPSBlast$DB"/>
<class name="compbio.runner._impl.RPSBlast"/>
<class name="compbio.runner._impl.RPSBlastTester"/>
<class name="compbio.runner._impl.Ronn"/>
<class name="compbio.runner._impl.RonnTester"/>
<class name="compbio.runner._impl.Runners"/>
<class name="compbio.runner._impl.Tmhmm2"/>
<class name="compbio.runner._impl.Tmhmm2Tester"/>
<class name="compbio.runner._jpred._Jpred"/>
<class name="compbio.runner.conservation.AACon"/>
<class name="compbio.runner.conservation.AAConTester"/>
<class name="compbio.runner.disorder.Disembl"/>
<class name="compbio.runner.disorder.DisemblTester"/>
<class name="compbio.runner.disorder.GlobPlot"/>
<class name="compbio.runner.disorder.GlobPlotTester"/>
<class name="compbio.runner.disorder.IUPred"/>
<class name="compbio.runner.disorder.IUPredTester"/>
<class name="compbio.runner.disorder.Jronn"/>
<class name="compbio.runner.disorder.JronnTester"/>
<class name="compbio.runner.msa.ClustalW"/>
<class name="compbio.runner.msa.ClustalWParametersTester"/>
<class name="compbio.runner.msa.ClustalWTester"/>
<class name="compbio.runner.msa.LimitTester"/>
<class name="compbio.runner.msa.Mafft"/>
<class name="compbio.runner.msa.MafftParametersTester"/>
<class name="compbio.runner.msa.MafftTester"/>
<class name="compbio.runner.msa.Muscle"/>
<class name="compbio.runner.msa.MuscleParametersTester"/>
<class name="compbio.runner.msa.MuscleTester"/>
<class name="compbio.runner.msa.Probcons"/>
<class name="compbio.runner.msa.ProbconsParametersTester"/>
<class name="compbio.runner.msa.ProbconsTester"/>
<class name="compbio.runner.msa.Tcoffee"/>
<class name="compbio.runner.msa.TcoffeeParametersTester"/>
<class name="compbio.runner.msa.TcoffeeTester"/>
<class name="compbio.runner.psiblast.PsiBlast"/>
<class name="compbio.stat.collector.ExecutionStatCollector$1"/>
<class name="compbio.stat.collector.ExecutionStatCollector$JobDirectory"/>
<class name="compbio.stat.collector.ExecutionStatCollector"/>
<class name="compbio.stat.collector.ExecutionStatCollectorTester"/>
<class name="compbio.stat.collector.JobStat$1"/>
<class name="compbio.stat.collector.JobStat$2"/>
<class name="compbio.stat.collector.JobStat$3"/>
<class name="compbio.stat.collector.JobStat"/>
<class name="compbio.stat.collector.StatDB"/>
<class name="compbio.stat.collector.StatDBTester"/>
<class name="compbio.stat.collector.StatProcessor"/>
<class name="compbio.stat.servlet.AnnualStat"/>
<class name="compbio.stat.servlet.DisplayStat"/>
<class name="compbio.stat.servlet.Joblist"/>
<class name="compbio.stat.servlet.StatisticCollector"/>
<class name="compbio.stat.servlet.util.StatCollection$Stattype"/>
<class name="compbio.stat.servlet.util.StatCollection"/>
<class name="compbio.stat.servlet.util.StatCollectionTester"/>
<class name="compbio.stat.servlet.util.Totals"/>
<class name="compbio.ws.client.AAConClient"/>
<class name="compbio.ws.client.AAConWSClientExample"/>
<class name="compbio.ws.client.CmdHelper"/>
<class name="compbio.ws.client.Constraints"/>
<class name="compbio.ws.client.IOHelper"/>
<class name="compbio.ws.client.Jws2Client"/>
<class name="compbio.ws.client.MetadataHelper"/>
<class name="compbio.ws.client.Services$1"/>
<class name="compbio.ws.client.Services"/>
<class name="compbio.ws.client.TestAAConWS"/>
<class name="compbio.ws.client.WSTester"/>
<class name="compbio.ws.client.WSTesterTester"/>
<class name="compbio.ws.server.AAConWS"/>
<class name="compbio.ws.server.ClustalWS"/>
<class name="compbio.ws.server.DisemblWS"/>
<class name="compbio.ws.server.GenericMetadataService"/>
<class name="compbio.ws.server.GlobPlotWS"/>
<class name="compbio.ws.server.IUPredWS"/>
<class name="compbio.ws.server.JronnWS"/>
<class name="compbio.ws.server.MafftWS"/>
<class name="compbio.ws.server.MuscleWS"/>
<class name="compbio.ws.server.ProbconsWS"/>
<class name="compbio.ws.server.RegistryWS"/>
<class name="compbio.ws.server.RegistryWSTester"/>
<class name="compbio.ws.server.SequenceAnnotationService"/>
<class name="compbio.ws.server.ShutdownEngines"/>
<class name="compbio.ws.server.SimpleWSPublisher"/>
<class name="compbio.ws.server.TcoffeeWS"/>
<class name="compbio.ws.server.WSUtil"/>
<class name="compbio.ws.server._MsaService"/>
<class name="compbio.ws.server._WSLogger"/>
</classes>
</test>
</suite>