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Jalview2 comes in two distinct flavours.
The main application allows connection to multiple web services provided
at the University of Dundee as well as a host of additional useful features
such as printing, making images from your alignment and annotating your
alignment.
You need to download and install this software.
Pressing one of the buttons below will load up a cut down version
of Jalview2 multiple alignment editor, which runs within your web browser.
Alignment 1 - Serine proteases (6 sequences x 279 residues)
Alignment 2 - Lipases (16 sequences x 487 residues)
Alignment 3 - Glutathione S-transferases (61 sequences x 290 residues) With associated tree
The applet takes the following Parameters:
| name |
value |
| file |
fileName |
| showFullId |
true false |
| showAnnotation |
true false |
| showConservation |
true false |
| showQuality |
true false |
| showConsensus |
true false |
| defaultColour |
Clustal, Blosum62, % Identity, Zappo, Hydrophobic, Helix Propensity,
Strand Propensity, Turn Propensity, Buried Index, Nucleotide |
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