import jalview.fts.api.FTSDataColumnI;
import jalview.fts.core.FTSRestRequest;
import jalview.fts.core.FTSRestResponse;
+import jalview.gui.JvOptionPane;
import java.io.BufferedReader;
import java.io.FileReader;
import org.json.simple.parser.ParseException;
import org.testng.Assert;
import org.testng.annotations.AfterMethod;
+import org.testng.annotations.BeforeClass;
import org.testng.annotations.BeforeMethod;
import org.testng.annotations.Test;
public class PDBFTSRestClientTest
{
+ @BeforeClass(alwaysRun = true)
+ public void setUpJvOptionPane()
+ {
+ JvOptionPane.setInteractiveMode(false);
+ JvOptionPane.setMockResponse(JvOptionPane.CANCEL_OPTION);
+ }
+
@BeforeMethod(alwaysRun = true)
public void setUp() throws Exception
{
}
- @AfterMethod
+ @AfterMethod(alwaysRun = true)
public void tearDown() throws Exception
{
}
{
wantedFields.add(PDBFTSRestClient.getInstance()
.getDataColumnByNameOrCode("molecule_type"));
- wantedFields
-.add(PDBFTSRestClient.getInstance()
+ wantedFields.add(PDBFTSRestClient.getInstance()
.getDataColumnByNameOrCode("pdb_id"));
wantedFields.add(PDBFTSRestClient.getInstance()
.getDataColumnByNameOrCode("genus"));
- wantedFields
-.add(PDBFTSRestClient.getInstance()
+ wantedFields.add(PDBFTSRestClient.getInstance()
.getDataColumnByNameOrCode("gene_name"));
wantedFields.add(PDBFTSRestClient.getInstance()
.getDataColumnByNameOrCode("title"));
{
wantedFields.add(PDBFTSRestClient.getInstance()
.getDataColumnByNameOrCode("molecule_type"));
- wantedFields
-.add(PDBFTSRestClient.getInstance()
+ wantedFields.add(PDBFTSRestClient.getInstance()
.getDataColumnByNameOrCode("pdb_id"));
wantedFields.add(PDBFTSRestClient.getInstance()
.getDataColumnByNameOrCode("genus"));
- wantedFields
-.add(PDBFTSRestClient.getInstance()
+ wantedFields.add(PDBFTSRestClient.getInstance()
.getDataColumnByNameOrCode("gene_name"));
wantedFields.add(PDBFTSRestClient.getInstance()
.getDataColumnByNameOrCode("title"));
{
wantedFields.add(PDBFTSRestClient.getInstance()
.getDataColumnByNameOrCode("molecule_type"));
- wantedFields
-.add(PDBFTSRestClient.getInstance()
+ wantedFields.add(PDBFTSRestClient.getInstance()
.getDataColumnByNameOrCode("pdb_id"));
wantedFields.add(PDBFTSRestClient.getInstance()
.getDataColumnByNameOrCode("genus"));
- wantedFields
-.add(PDBFTSRestClient.getInstance()
+ wantedFields.add(PDBFTSRestClient.getInstance()
.getDataColumnByNameOrCode("gene_name"));
wantedFields.add(PDBFTSRestClient.getInstance()
.getDataColumnByNameOrCode("title"));
assertEquals(expectedErrorMsg, parsedErrorResponse);
}
- @Test(
- groups = { "External" },
- expectedExceptions = Exception.class)
+ @Test(groups = { "External" }, expectedExceptions = Exception.class)
public void testForExpectedRuntimeException() throws Exception
{
List<FTSDataColumnI> wantedFields = new ArrayList<FTSDataColumnI>();
PDBFTSRestClient.getInstance().executeRequest(request);
}
- // JBP: Is this actually external ? Looks like it is mocked
+ // JBP: Is this actually external ? Looks like it is mocked
@Test(groups = { "External" })
public void parsePDBJsonResponseTest()
{
{
wantedFields.add(PDBFTSRestClient.getInstance()
.getDataColumnByNameOrCode("molecule_type"));
- wantedFields
-.add(PDBFTSRestClient.getInstance()
+ wantedFields.add(PDBFTSRestClient.getInstance()
.getDataColumnByNameOrCode("pdb_id"));
wantedFields.add(PDBFTSRestClient.getInstance()
.getDataColumnByNameOrCode("genus"));
- wantedFields
-.add(PDBFTSRestClient.getInstance()
+ wantedFields.add(PDBFTSRestClient.getInstance()
.getDataColumnByNameOrCode("gene_name"));
wantedFields.add(PDBFTSRestClient.getInstance()
.getDataColumnByNameOrCode("title"));
.getDataColumnByNameOrCode("molecule_type"));
wantedFields.add(PDBFTSRestClient.getInstance()
.getDataColumnByNameOrCode("genus"));
- wantedFields
-.add(PDBFTSRestClient.getInstance()
+ wantedFields.add(PDBFTSRestClient.getInstance()
.getDataColumnByNameOrCode("gene_name"));
wantedFields.add(PDBFTSRestClient.getInstance()
.getDataColumnByNameOrCode("title"));
- wantedFields
-.add(PDBFTSRestClient.getInstance()
+ wantedFields.add(PDBFTSRestClient.getInstance()
.getDataColumnByNameOrCode("pdb_id"));
} catch (Exception e)
{
}
try
{
- assertEquals(5,
- PDBFTSRestClient.getInstance()
+ assertEquals(5, PDBFTSRestClient.getInstance()
.getPrimaryKeyColumIndex(wantedFields, true));
- assertEquals(4,
- PDBFTSRestClient.getInstance()
+ assertEquals(4, PDBFTSRestClient.getInstance()
.getPrimaryKeyColumIndex(wantedFields, false));
} catch (Exception e)
{