-
-
- exclude (".*")
- exclude ("**/.*")
- exclude ("*.class")
- exclude ("**/*.class")
- include (eclipse_extra_jdt_prefs_file)
- include ("AUTHORS")
- include ("CITATION")
- include ("FEATURETODO")
- include ("JAVA-11-README")
- include ("FEATURETODO")
- include ("LICENSE")
- include ("README")
- include ("RELEASE")
- include ("THIRDPARTYLIBS")
- include ("build.gradle")
- include ("gradle.properties")
- include ("$sourceDir/*.java")
- include ("$sourceDir/**/*.java")
- include ("$sourceDir/**/*.cdr")
- include ("$j8libDir/**/*.jar")
- include ("$j11libDir/**/*.jar")
- include ("$resourceDir/**/*")
- include ("$helpDir/**/*")
- include ("$schemaDir/**/*")
- include ("$utilsDir/**/*")
- include ("$docDir/**/*")
- include ("$examplesDir/**/*")
- include ("getdown/**/*")
- //include ("jalview-jalopy.xml")
- //include ("JalviewApplet.jpx")
- //include ("JalviewX.jpx")
- //include ("nbbuild.xml")
- //include ("nbproject/genfiles.properties")
- //include ("nbproject/project.properties")
- //include ("nbproject/project.xml")
-
+
+ def EXCLUDE_FILES=["build/*","bin/*","test-output/","test-reports","tests","clover*/*"
+ ,".*"
+ ,"benchmarking/*"
+ ,"**/.*"
+ ,"*.class"
+ ,"**/*.class","$j11modDir/**/*.jar","appletlib","**/*locales"
+ ,"*locales/**",
+ ,"utils/InstallAnywhere"]
+ def PROCESS_FILES=[ "AUTHORS",
+ "CITATION",
+ "FEATURETODO",
+ "JAVA-11-README",
+ "FEATURETODO",
+ "LICENSE",
+ "**/README",
+ "RELEASE",
+ "THIRDPARTYLIBS","TESTNG",
+ "build.gradle",
+ "gradle.properties",
+ "**/*.java",
+ "**/*.html",
+ "**/*.xml",
+ "**/*.gradle",
+ "**/*.groovy",
+ "**/*.properties",
+ "**/*.perl",
+ "**/*.sh"]
+
+ from(jalviewDir) {
+ exclude (EXCLUDE_FILES)
+ include (PROCESS_FILES)
+ filter(ReplaceTokens, beginToken: '$$', endToken: '$$', tokens: ['Version-Rel': JALVIEW_VERSION,'Year-Rel': getDate("yyyy")])
+ }
+ from(jalviewDir) {
+ exclude (EXCLUDE_FILES)
+ exclude (PROCESS_FILES)