+ public int RemoveJobByDate(String date1, String date2) {
+ if (date1 == null || date2 == null)
+ return 0;
+
+ int njobs = 0;
+ Long dateBegin = convertDate(date1);
+ Long dateEnd = convertDate(date2);
+ Calendar start = Calendar.getInstance();
+ start.setTime(new Date(dateBegin));
+ Calendar end = Calendar.getInstance();
+ end.setTime(new Date(dateEnd));
+
+ for (Date date = start.getTime(); !start.after(end); start.add(Calendar.DATE, 1), date = start.getTime()) {
+ String com1 = "SELECT JobID FROM ProteinData WHERE jobtime = " + date.getTime() + ";";
+ System.out.println("Command: " + com1);
+ ResultSet results = CassandraQuery(com1);
+ if (!results.isExhausted()) {
+ List<Row> rows = results.all();
+ for (Row r : rows) {
+ String jobid = r.getString("JobID");
+ if (jobid != null) {
+ njobs += RemoveJob(jobid, date.getTime());
+ }
+ }
+ }
+
+ String com2 = "SELECT JobID FROM FailLog WHERE jobtime = " + date.getTime() + ";";
+ ResultSet resultsfail = CassandraQuery(com2);
+ if (!resultsfail.isExhausted()) {
+ List<Row> rows = resultsfail.all();
+ for (Row r : rows) {
+ String jobid = r.getString("JobID");
+ if (jobid != null) {
+ njobs += RemoveJob(jobid, date.getTime());
+ }
+ }
+ }
+ }
+ return njobs;
+ }
+
+ /**
+ * external method for deleting jobs launched from a particular IP (strategy
+ * 2)
+ *
+ * @param ip
+ * the IP
+ *
+ * @return a number of deleted jobs
+ *
+ */
+ public int RemoveJobByIp(String ip) {
+ int njobs = 0;
+ if (ip == null)
+ return 0;
+ String com = "SELECT databegin, JobID FROM ProteinLog WHERE ip = '" + ip + "';";
+ ResultSet results = CassandraQuery(com);
+ if (!results.isExhausted()) {
+ List<Row> rows = results.all();
+ for (Row r : rows) {
+ Long date = convertDate(r.getString("databegin"));
+ String jobid = r.getString("JobID");
+ if (date != null || jobid != null) {
+ njobs += RemoveJob(jobid, date);
+ }
+ }
+ }
+ return njobs;
+ }
+
+ /**
+ * external method for deleting jobs with a protein sequence (strategy 3)
+ *
+ * @param sequence
+ * the sequence
+ *
+ * @return a number of deleted jobs
+ *
+ */
+ public int RemoveJobBySequence(String sequence) {
+ int njobs = 0;
+ if (sequence == null)
+ return 0;
+ String com = "SELECT JobID FROM ProteinRow WHERE Protein = '" + sequence + "';";
+ ResultSet results = CassandraQuery(com);
+ if (!results.isExhausted()) {
+ List<Row> rows = results.all();
+ for (Row r : rows) {
+ String jobid = r.getString("JobID");
+ long date = FindJobDate(jobid);
+ njobs += RemoveJob(jobid, date);
+ }
+ }
+ return njobs;
+ }
+
+ private long FindJobDate(String jobid) {
+ String com = "SELECT databegin FROM ProteinLog WHERE JobID = '" + jobid + "';";
+ ResultSet results = CassandraQuery(com);
+ if (!results.isExhausted()) {
+ return convertDate(results.one().getString("databegin"));
+ }
+ return -1L;
+ }
+
+ private String FindStatus(String jobid) {
+ String com = "SELECT FinalStatus FROM ProteinLog WHERE JobID = '" + jobid + "';";