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Fix problem with new table column names: ProgrammeName -> ProgramName, Version -...
[proteocache.git]
/
datadb
/
compbio
/
cassandra
/
JpredParserLocalFile.java
diff --git
a/datadb/compbio/cassandra/JpredParserLocalFile.java
b/datadb/compbio/cassandra/JpredParserLocalFile.java
index
d4a22e6
..
e2e5dc9
100644
(file)
--- a/
datadb/compbio/cassandra/JpredParserLocalFile.java
+++ b/
datadb/compbio/cassandra/JpredParserLocalFile.java
@@
-15,6
+15,9
@@
import java.util.Calendar;
import java.util.Date;
import java.util.List;
import java.util.Date;
import java.util.List;
+import compbio.data.sequence.FastaReader;
+import compbio.data.sequence.FastaSequence;
+
public class JpredParserLocalFile implements JpredParser {
private CassandraWriter cw = new CassandraWriter();
private String dirprefix;
public class JpredParserLocalFile implements JpredParser {
private CassandraWriter cw = new CassandraWriter();
private String dirprefix;
@@
-103,7
+106,9
@@
public class JpredParserLocalFile implements JpredParser {
} catch (ParseException e) {
e.printStackTrace();
}
} catch (ParseException e) {
e.printStackTrace();
}
- //countinsertions += cw.FormQueryTables(insertdate, starttime, finishtime, ip, id, "OK", "OK", newprotein, seqs);
+ // countinsertions += cw.FormQueryTables(insertdate,
+ // starttime, finishtime, ip, id, "OK", "OK",
+ // newprotein, seqs);
}
fr.close();
} catch (IOException e) {
}
fr.close();
} catch (IOException e) {