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Merge branch 'develop' into features/JAL-518_justify_seqs_in_region
[jalview.git]
/
examples
/
groovy
/
alignLoadedFile.groovy
diff --git
a/examples/groovy/alignLoadedFile.groovy
b/examples/groovy/alignLoadedFile.groovy
index
764fdae
..
df68e2b
100644
(file)
--- a/
examples/groovy/alignLoadedFile.groovy
+++ b/
examples/groovy/alignLoadedFile.groovy
@@
-20,6
+20,7
@@
*/
// run an alignment on the current alignFrame
import jalview.ws.jws2.*;
*/
// run an alignment on the current alignFrame
import jalview.ws.jws2.*;
+import jalview.ws.jws2.jabaws2.Jws2Instance;
import jalview.datamodel.*;
// First get the JABA service discoverer and see if there are any services.
import jalview.datamodel.*;
// First get the JABA service discoverer and see if there are any services.
@@
-33,7
+34,7
@@
if (!disc.isRunning() && !disc.hasServices())
disc.run();
}
disc.run();
}
-for (jalview.ws.jws2.Jws2Discoverer.Jws2Instance service: disc.getServices()) {
+for (jalview.ws.jws2.jabaws2.Jws2Instance service: disc.getServices()) {
if (service.serviceType.indexOf("uscle")>-1) {
// now - go through the services if any, and find a Muscle service
if (service.serviceType.indexOf("uscle")>-1) {
// now - go through the services if any, and find a Muscle service