- public PCAModel(AlignmentView seqstrings2, SequenceI[] seqs2,
- boolean nucleotide2)
- {
- seqstrings = seqstrings2;
- seqs = seqs2;
- nucleotide = nucleotide2;
- score_matrix = nucleotide2 ? "DNA" : "BLOSUM62";
- }
-
- private volatile PCA pca;
-
- int top;
-
- AlignmentView seqstrings;