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moved methods for opening a stored session document in a new vamsas session into...
[vamsas.git]
/
src
/
uk
/
ac
/
vamsas
/
objects
/
utils
/
trees
/
NewickFile.java
diff --git
a/src/uk/ac/vamsas/objects/utils/trees/NewickFile.java
b/src/uk/ac/vamsas/objects/utils/trees/NewickFile.java
index
4fd878c
..
d6f5f57
100644
(file)
--- a/
src/uk/ac/vamsas/objects/utils/trees/NewickFile.java
+++ b/
src/uk/ac/vamsas/objects/utils/trees/NewickFile.java
@@
-56,7
+56,7
@@
public class NewickFile {
// File IO Flags
\r
boolean ReplaceUnderscores = true;
\r
\r
// File IO Flags
\r
boolean ReplaceUnderscores = true;
\r
\r
- boolean printRootInfo = false;
\r
+ boolean printRootInfo = true; // in case root has anything to preserve
\r
\r
private Pattern[] NodeSafeName = new Pattern[] {
\r
Pattern.compile("[\\[,:'()]"), // test for requiring quotes
\r
\r
private Pattern[] NodeSafeName = new Pattern[] {
\r
Pattern.compile("[\\[,:'()]"), // test for requiring quotes
\r