-Jalview Release 2.01\r
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+Jalview Readme\r
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-This is the complete source for Jalview 2.01. \r
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The source is available as a tar file and comes complete with the GNU General Public License. \r
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To build the application you will need a J2SDK 1.4+. \r
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-An Ant build file (build.xml) is provided, you will need to install Apache Ant first. Run ant to build the application, use the target "makeApplet" to make the Applet.\r
+An Ant build file (build.xml) is provided, you will need to install Apache Ant first. \r
+Run ant to view usage which will display a list of useful build targets.\r
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You can also use Borland JBuilder to build Jalview. A JBuilder project file (JalviewX.jpx, JalviewApplet.jpx) for both application and applet is provided.\r
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+If you use a proxy server add \r
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+-Dhttp.proxyServer=YOUR.SERVER -Dhttp.proxyPort=YOURPORT\r
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+If the proxy server requires authentication, add\r
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+-Dhttp.proxyUser=USERNAME -Dhttp.proxyPassword=PASSWORD\r